RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 NAA11Q9BSU3 229 aaPredicted RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 FUCA2Q9BTY2 467 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 SLC2A11Q9BYW1 496 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 PLCXD1Q9NUJ7 323 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 INTS10Q9NVR2 710 aaKnown RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 KLHL8Q9P2G9 620 aaPredicted RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 GIMAP2Q9UG22 337 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 MRPS28Q9Y2Q9 187 aaKnown RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 PPP2R2CQ9Y2T4 447 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 TRAV24A0A0B4J272 114 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 TRBV5-5A0A0J9YX44 114 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 SEC24AO95486 1093 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZNF883P0CG24 379 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 DARSP14868 501 aaKnown RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 ERCC2P18074 760 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 TYMPP19971 482 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 LEPRP48357 1165 aaKnown RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 LUMP51884 338 aaPredicted RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 GSDMDP57764 484 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 DLK1P80370 383 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZNF273Q14593 569 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 C1orf141Q5JVX7 400 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 SUSD4Q5VX71 490 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 OR4A47Q6IF82 309 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 TMEM207Q6UWW9 146 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZNF497Q6ZNH5 498 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ERN2Q76MJ5 926 aaKnown RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 BTN2A1Q7KYR7 527 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 G2E3Q7L622 706 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 MFN1Q8IWA4 741 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 LGI2Q8N0V4 545 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 SLC4A11Q8NBS3 891 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 DBF4BQ8NFT6 615 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 OR13C3Q8NGS6 347 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 HCAR2Q8TDS4 363 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 APOBEC4Q8WW27 367 aaKnown RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZNRF4Q8WWF5 429 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZNF653Q96CK0 615 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 THOC1Q96FV9 657 aaKnown RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 POM121L2Q96KW2 1035 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 RMDN2Q96LZ7 410 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 FER1L6-AS2Q96M78 137 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 SPATA33Q96N06 139 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 KRT12Q99456 494 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 BAG1Q99933 345 aaPredicted RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 CCDC3Q9BQI4 270 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZMYND12Q9H0C1 365 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 P2RY12Q9H244 342 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 MAN2C1Q9NTJ4 1040 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ZDHHC18Q9NUE0 388 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 OR6C2Q9NZP2 312 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 CFDP1Q9UEE9 299 aaPredicted RBP2.51□□□□□ -2.01
GYPB-207ENST00000506679 EPHA6Q9UF33 1036 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 ASIC3Q9UHC3 531 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 TNNQ9UQP3 1299 aa2.51□□□□□ -2.01
GYPB-207ENST00000506679 HEG1Q9ULI3 1381 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 A0A087WV48 116 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 C15orf61A6NNL5 157 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 KRTAP16-1A8MUX0 517 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 H7C0S8 307 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ARHGEF9O43307 516 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 BAG3O95817 575 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 PTAFRP25105 342 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 AZGP1P25311 298 aaKnown RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 CDC25CP30307 473 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 SNRPD1P62314 119 aaKnown RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 CSNK2BP67870 215 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 IRX1P78414 480 aaPredicted RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 GUCY2DQ02846 1103 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 SRSF9Q13242 221 aaKnown RBP eCLIP2.5□□□□□ -2.01
GYPB-207ENST00000506679 EXT1Q16394 746 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 GPR33Q49SQ1 333 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 FIP1L1Q6UN15 594 aaKnown RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 IL27RAQ6UWB1 636 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 LEKR1Q6ZMV7 388 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 Q6ZRP5 223 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ANKRD33Q7Z3H0 272 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ANKRD13CQ8N6S4 541 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ZNF614Q8N883 585 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 NIPA2Q8N8Q9 360 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 MAPK1IP1LQ8NDC0 245 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 Q8NFD4 153 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 MRPS27Q92552 414 aaKnown RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 PROX1Q92786 737 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 RADILQ96JH8 1075 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 CNDP2Q96KP4 475 aaKnown RBP2.5□□□□□ -2.01
GYPB-207ENST00000506679 ZNF558Q96NG5 402 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 EGFL8Q99944 293 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 PANK2Q9BZ23 570 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 CHST11Q9NPF2 352 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 GSN-AS1Q9NRJ2 163 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ERAP1Q9NZ08 941 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 TBC1D7Q9P0N9 293 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 WDR37Q9Y2I8 494 aa2.5□□□□□ -2.01
GYPB-207ENST00000506679 ANXA2P2A6NMY6 339 aa2.49□□□□□ -2.01
GYPB-207ENST00000506679 EPHB6O15197 1021 aa2.49□□□□□ -2.01
GYPB-207ENST00000506679 TEX28O15482 410 aa2.49□□□□□ -2.01
GYPB-207ENST00000506679 SNX3O60493 162 aa2.49□□□□□ -2.01
GYPB-207ENST00000506679 GSRP00390 522 aa2.49□□□□□ -2.01
GYPB-207ENST00000506679 HSP90AA1P07900 732 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms