RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CINPQ9BW66 212 aaPredicted RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 WWP1Q9H0M0 922 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 EPB41L4BQ9H329 900 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 FAM83DQ9H4H8 585 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 TFB2MQ9H5Q4 396 aaKnown RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 XKR8Q9H6D3 395 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 ASB8Q9H765 288 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 SYNPO2LQ9H987 977 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 CHODLQ9H9P2 273 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 MMP25Q9NPA2 562 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 SPHK1Q9NYA1 384 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 NFKBIL1Q9UBC1 381 aaPredicted RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 GDF2Q9UK05 429 aaPredicted RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 CFAP45Q9UL16 551 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 ACSL5Q9ULC5 683 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 KLF13Q9Y2Y9 288 aaPredicted RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 NFS1Q9Y697 457 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 MORC2Q9Y6X9 1032 aaPredicted RBP3.11□□□□□ -1.91
TCOF1-208ENST00000506063 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
TCOF1-208ENST00000506063 A0A0J9YY10 115 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 FEZF1A0PJY2 475 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 FAM234BA2RU67 622 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 RGSL1A5PLK6 1076 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MBD3L3A6NE82 208 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 FAM166BA8MTA8 275 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 C2orf74A8MZ97 194 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EEF1E1-BLOC1S5C9J1V9 151 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CDK2AP1O14519 115 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 HS3ST1O14792 307 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EPHB6O15197 1021 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GPR39O43194 453 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EEF1E1O43324 174 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SGTAO43765 313 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SUSD5O60279 629 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KCNJ13O60928 360 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 POP7O75817 140 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 LETM1O95202 739 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EPPINO95925 133 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 IL18BPO95998 194 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MT-CYBP00156 380 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KRT13P13646 458 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GABRA1P14867 456 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CXCR2P25025 360 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 EPHB2P29323 1055 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CDKN1AP38936 164 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GABRB2P47870 512 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CYB561P49447 251 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 HLCSP50747 726 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MTTPP55157 894 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ADARP55265 1226 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MAXP61244 160 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ATP11AP98196 1134 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 AMPD3Q01432 767 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 APBA1Q02410 837 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GCNT1Q02742 428 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 OCA2Q04671 838 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TMEM115Q12893 351 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 FOXF2Q12947 444 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 XRCC4Q13426 336 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TAZQ16635 292 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 C15orf59Q2T9L4 293 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CR1LQ2VPA4 569 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF658BQ4V348 819 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ZNF569Q5MCW4 686 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 YOD1Q5VVQ6 348 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 GARNL3Q5VVW2 1013 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ALS2CLQ60I27 953 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 FAM166AQ6J272 317 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 DEF8Q6ZN54 512 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 RRAGAQ7L523 313 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ARCQ7LC44 396 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CPEB2Q7Z5Q1 589 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 BTLAQ7Z6A9 289 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PEG10Q86TG7 708 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 AMZ2Q86W34 360 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TRAPPC5Q8IUR0 188 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PASD1Q8IV76 773 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 ZC3H7AQ8IWR0 971 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 PPM1KQ8N3J5 372 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 KIF2BQ8N4N8 673 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 IQUBQ8NA54 791 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 OR52E1Q8NGJ3 308 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 LILRB1Q8NHL6 650 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 MBD3L2Q8NHZ7 208 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 LCN9Q8WX39 176 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 CENPIQ92674 756 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 N4BP2L2Q92802 583 aaPredicted RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SLC35C1Q96A29 364 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 NTAN1Q96AB6 310 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 DHX58Q96C10 678 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SPATA32Q96LK8 384 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 VPS35Q96QK1 796 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 USP28Q96RU2 1077 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 SOX7Q9BT81 388 aa3.1□□□□□ -1.91
TCOF1-208ENST00000506063 RBM24Q9BX46 236 aaKnown RBP3.1□□□□□ -1.91
TCOF1-208ENST00000506063 NAA15Q9BXJ9 866 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms