RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RNF165Q6ZSG1 346 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 USP45Q70EL2 814 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 SYT12Q8IV01 421 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 PLPP6Q8IY26 295 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 CMTM8Q8IZV2 173 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 CENPSQ8N2Z9 138 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 ABHD11Q8NFV4 315 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 OR2T29Q8NH02 315 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 TRUB1Q8WWH5 349 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 MUL1Q969V5 352 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 TESCQ96BS2 214 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 FRG2BQ96QU4 278 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 REXO4Q9GZR2 422 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 SMG9Q9H0W8 520 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 TRIT1Q9H3H1 467 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 SUV39H2Q9H5I1 410 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 IL1RAPQ9NPH3 570 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 RASSF1Q9NS23 344 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 TBCCD1Q9NVR7 557 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 CHCHD3Q9NX63 227 aaKnown RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 PDP1Q9P0J1 537 aaPredicted RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 KIAA1522Q9P206 1035 aaPredicted RBP7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 VPS4AQ9UN37 437 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 MAN2B2Q9Y2E5 1009 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 SH3BP1Q9Y3L3 701 aa7.4□□□□□ -1.22
PPARGC1A-204ENST00000506055 KCNE1BA0A087WTH5 132 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 AGAP14A8MT82 685 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 ZNF99A8MXY4 864 aaPredicted RBP7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 GFRA2O00451 464 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 LATS1O95835 1130 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 SOD2P04179 222 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 SRCP12931 536 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 GABRR2P28476 465 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 MAPK1P28482 360 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 EPHA2P29317 976 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 ALDH4A1P30038 563 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 RYKP34925 604 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 OPRL1P41146 370 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 CCR3P51677 355 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 ATN1P54259 1190 aaPredicted RBP7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 NPTX1Q15818 432 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 CTF1Q16619 201 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 SMN1Q16637 294 aaKnown RBP7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 RFX4Q33E94 735 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 SERPINA13PQ6UXR4 307 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 LRRC70Q7Z2Q7 622 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 CLECL1Q8IZS7 167 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 UBE2FQ969M7 185 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 PPP1R14BQ96C90 147 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 TMEM169Q96HH4 297 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 TPD52L3Q96J77 140 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 RHNO1Q9BSD3 238 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 MRPL17Q9NRX2 175 aaKnown RBP7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 ERVK-11Q9UQG0 969 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 COQ6Q9Y2Z9 468 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 INSL5Q9Y5Q6 135 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 PIKFYVEQ9Y2I7 2098 aa7.4□□□□□ -1.23
PPARGC1A-204ENST00000506055 OR2AG2A6NM03 316 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 MAGEB17A8MXT2 336 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 UGT2B11O75310 529 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ARHGEF15O94989 841 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 KCNK5O95279 499 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 FABP3P05413 133 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 C8GP07360 202 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 COX7A2P14406 83 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ATP1B2P14415 290 aaPredicted RBP7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 HOXB9P17482 250 aaPredicted RBP7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 HOXD10P28358 340 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 CSNK1DP48730 415 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 CLK3P49761 638 aaKnown RBP7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 HNMTP50135 292 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 VLDLRP98155 873 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 OCA2Q04671 838 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 DUOXA1Q1HG43 343 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 RGS21Q2M5E4 152 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 MPPE1Q53F39 396 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 XKR6Q5GH73 641 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ZNF648Q5T619 568 aaPredicted RBP7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 GAREM2Q75VX8 874 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 B3GNT8Q7Z7M8 397 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 SLCO6A1Q86UG4 719 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 IGFN1Q86VF2 1251 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 HORMAD1Q86X24 394 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 RNF168Q8IYW5 571 aaPredicted RBP7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 FAM9CQ8IZT9 166 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ATG16L2Q8NAA4 619 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ZNF540Q8NDQ6 660 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 FIBINQ8TAL6 211 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 FAR1Q8WVX9 515 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 MYLIPQ8WY64 445 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 ELMO1Q92556 727 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 RORBQ92753 470 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 SCAMP4Q969E2 229 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 MED8Q96G25 268 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 BRD9Q9H8M2 597 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 PCDH12Q9NPG4 1184 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 DNAJC11Q9NVH1 559 aa7.39□□□□□ -1.23
PPARGC1A-204ENST00000506055 SELENONQ9NZV5 590 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms