RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KLK4Q9Y5K2 254 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 COMMD10Q9Y6G5 202 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 FITM1A5D6W6 292 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 AGPSO00116 658 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 CTSVO60911 334 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 PSIP1O75475 530 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 IPO13O94829 963 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 RNF224P0DH78 156 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 SKIV2L2P42285 1042 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 OR1D4P47884 311 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 FNTAP49354 379 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 CLCN7P51798 805 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 OCA2Q04671 838 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 PRDX1Q06830 199 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 RAPSNQ13702 412 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 FASTKQ14296 549 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 GBX1Q14549 363 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 PCGF5Q86SE9 256 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 PPIL6Q8IXY8 311 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 SLC35F6Q8N357 371 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 FKBP10Q96AY3 582 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 ZNF285Q96NJ3 590 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 PKP4Q99569 1192 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 TRIM56Q9BRZ2 755 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 DPH7Q9BTV6 452 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 ZNF304Q9HCX3 659 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 ENAMQ9NRM1 1142 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 SLC22A11Q9NSA0 550 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 TRMT1Q9NXH9 659 aaKnown RBP11.44□□□□□ -0.58
MED28-203ENST00000503945 CDC23Q9UJX2 597 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 DHRS7Q9Y394 339 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 SEC16AO15027 2179 aa11.44□□□□□ -0.58
MED28-203ENST00000503945 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 LOC105369274A0A096LPK9 316 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 A0A1W2PPV9 198 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 ARHGEF33A8MVX0 844 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 MYO1CO00159 1063 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 CES2O00748 559 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PHF2O75151 1096 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 CNOT3O75175 753 aaKnown RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 VPS26AO75436 327 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 HAUS5O94927 633 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SYF2O95926 243 aaKnown RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 UMODP07911 640 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 ERVK-10P10266 1014 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 ENO3P13929 434 aaPredicted RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 MMP11P24347 488 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 MCM3P25205 808 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PSMB5P28074 263 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 GCGRP47871 477 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PNLIPRP1P54315 467 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SOX8P57073 446 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 PTK6Q13882 451 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 MYBPC3Q14896 1274 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 INPP5JQ15735 1006 aaPredicted RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 NKG7Q16617 165 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 MUM1Q2TAK8 710 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 HSP90AA5PQ58FG0 334 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 VWA5B1Q5TIE3 1220 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 IRAK1BP1Q5VVH5 260 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 UGT3A1Q6NUS8 523 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PRMT9Q6P2P2 845 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SUSD1Q6UWL2 747 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PALM2Q8IXS6 379 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SSC4DQ8WTU2 575 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 ASB11Q8WXH4 323 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 TM9SF4Q92544 642 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 KCNJ9Q92806 393 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PNPLA2Q96AD5 504 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 EBNA1BP2Q99848 306 aaKnown RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 ZFYVE21Q9BQ24 234 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SLC26A1Q9H2B4 701 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 GRPEL1Q9HAV7 217 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 FBXO6Q9NRD1 293 aaPredicted RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 MAP10Q9P2G4 905 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 NXT1Q9UKK6 140 aaKnown RBP11.43□□□□□ -0.58
MED28-203ENST00000503945 FBXO5Q9UKT4 447 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 CDC14AQ9UNH5 594 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 MAU2Q9Y6X3 613 aa11.43□□□□□ -0.58
MED28-203ENST00000503945 PRRC2CQ9Y520 2896 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 PIKFYVEQ9Y2I7 2098 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 KRT87PA6NCN2 255 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 H0YGG7 62 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 GFYI3L273 518 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 TXNDC9O14530 226 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 SORBS2O94875 1100 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 CCNDBP1O95273 360 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 TTC4O95801 387 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 MPC1LP0DKB6 136 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 EMP3P54852 163 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 ARF3P61204 181 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms