RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	HLA-B	Q31612	363 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	CLEC6A	Q6EIG7	209 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	EPGN	Q6UW88	154 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	IL27RA	Q6UWB1	636 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SLCO4C1	Q6ZQN7	724 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	TMEM26	Q6ZUK4	368 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	MILR1	Q7Z6M3	343 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	ADGRF3	Q8IZF5	1079 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	ARL14	Q8N4G2	192 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	RAB42	Q8N4Z0	105 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	DCBLD1	Q8N8Z6	715 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SNX31	Q8N9S9	440 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	AVL9	Q8NBF6	648 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	OR2A1	Q8NGT9	310 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	FLVCR1-AS1	Q8TAF5	88 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	AGR3	Q8TD06	166 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SAP25	Q8TEE9	199 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	NEIL2	Q969S2	332 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	THOC1	Q96FV9	657 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SEC16B	Q96JE7	1060 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	MAEL	Q96JY0	434 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	CDK15	Q96Q40	435 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	HAUS8	Q9BT25	410 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC29A3	Q9BZD2	475 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	PCBD2	Q9H0N5	130 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	TUBB1	Q9H4B7	451 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	EHD1	Q9H4M9	534 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	STN1	Q9H668	368 aa	Known RBP	11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC24A3	Q9HC58	644 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	RNF11	Q9Y3C5	154 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	DNAJC15	Q9Y5T4	150 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	CABIN1	Q9Y6J0	2220 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	KCNE2	Q9Y6J6	123 aa		11.73	□□□□□ -0.53
MATR3-231	ENST00000502394	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	DNAH14	Q0VDD8	3507 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	LILRA5	A6NI73	299 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	BTN3A3	O00478	584 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	SDHD	O14521	159 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	PPM1D	O15297	605 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CLDN9	O95484	217 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CFI	P05156	583 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CAPN1	P07384	714 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CHRM5	P08912	532 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	JUP	P14923	745 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	PSMB5	P28074	263 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	MPL	P40238	635 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	HTR6	P50406	440 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	AQP5	P55064	265 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	HHEX	Q03014	270 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	BTK	Q06187	659 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TCF15	Q12870	199 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CHIT1	Q13231	466 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	DOC2A	Q14183	400 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	LPAL2	Q16609	132 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	C14orf28	Q4W4Y0	310 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TRIM61	Q5EBN2	209 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	XKR7	Q5GH72	579 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	LIPJ	Q5W064	366 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	ATG9B	Q674R7	924 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	GRHL2	Q6ISB3	625 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	ZC3H14	Q6PJT7	736 aa	Known RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	AMIGO1	Q86WK6	493 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	FAM129C	Q86XR2	697 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TRIM48	Q8IWZ4	208 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	CDYL2	Q8N8U2	506 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	ANKS4B	Q8N8V4	417 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	ABHD11	Q8NFV4	315 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TWIST2	Q8WVJ9	160 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	SLC5A11	Q8WWX8	675 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	LCN9	Q8WX39	176 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	JPH3	Q8WXH2	748 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	PRR11	Q96HE9	360 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	EBF4	Q9BQW3	602 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	LRFN3	Q9BTN0	628 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TMEM120A	Q9BXJ8	343 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	MEAF6	Q9HAF1	191 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	IL21R	Q9HBE5	538 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	PRDM9	Q9NQV7	894 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	SPHK1	Q9NYA1	384 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TAC3	Q9UHF0	121 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	DCTN4	Q9UJW0	460 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	DOLK	Q9UPQ8	538 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	TIMM22	Q9Y584	194 aa		11.72	□□□□□ -0.53
MATR3-231	ENST00000502394	IGKV1-8	A0A0C4DH67	115 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	SERTM1	A2A2V5	107 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	CLGN	O14967	610 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	HGF	P14210	728 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	GNAZ	P19086	355 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	SERPINB3	P29508	390 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	HNF4A	P41235	474 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	IDH3A	P50213	366 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	ARFIP2	P53365	341 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	YBX1	P67809	324 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	IRF8	Q02556	426 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	GUCA2A	Q02747	115 aa		11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	PRDX1	Q06830	199 aa	Known RBP	11.71	□□□□□ -0.53
MATR3-231	ENST00000502394	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.71	□□□□□ -0.53	2e-8	■■□□□ 13.7

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms