RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TTYH2Q9BSA4 534 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KRTAP4-11Q9BYQ6 195 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ASPSCR1Q9BZE9 553 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 EDEM3Q9BZQ6 932 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ALDH8A1Q9H2A2 487 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 OPA3Q9H6K4 179 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TDRD3Q9H7E2 651 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 POLE3Q9NRF9 147 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MIOSQ9NXC5 875 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA6AQ9NYA3 693 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ACSL6Q9UKU0 697 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CA14Q9ULX7 337 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NAALADL1Q9UQQ1 740 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MRPS33Q9Y291 106 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 SPO11Q9Y5K1 396 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD36BQ8N2N9 1353 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 A0A087X1B8 175 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 C13orf42A0A1B0GVH6 325 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FUOMA2VDF0 154 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KLRG2A4D1S0 409 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 LRRC37AA6NMS7 1700 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GSG1L2A8MUP6 293 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SNURFLB1AK76 121 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 INO80B-WBP1J3KQ70 363 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RHODO00212 210 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPEF2O14830 753 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC27A2O14975 620 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 STX7O15400 261 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CLASP2O75122 1294 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 MPDU1O75352 247 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TJP3O95049 919 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NKX2-2O95096 273 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZBTB11O95625 1053 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 C6orf47O95873 294 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LTFP02788 710 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MT-ND1P03886 318 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FCER2P06734 321 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 IFIT1P09914 478 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZDHHC11BP0C7U3 371 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SPATA31D3P0C874 917 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CDH3P22223 829 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ADSSP30520 456 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SHMT2P34897 504 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PTGER1P34995 402 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PGM1P36871 562 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SYKP43405 635 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CSNK1EP49674 416 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF165P49910 485 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CACNB3P54284 484 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MLLT10P55197 1068 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PAX9P55771 341 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GCNT1Q02742 428 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 POU3F1Q03052 451 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPIL2Q13356 520 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PICALMQ13492 652 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DCTN2Q13561 401 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 MTMR1Q13613 665 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PRICKLE4Q2TBC4 344 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF792Q3KQV3 632 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CCDC158Q5M9N0 1113 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CEP85LQ5SZL2 805 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DCST1Q5T197 706 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM69AQ5T7M9 428 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CDCP2Q5VXM1 449 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LMBRD2Q68DH5 695 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRIM68Q6AZZ1 485 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GRHL2Q6ISB3 625 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HEPN1Q6WQI6 88 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SPATA31D4Q6ZUB0 917 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ASB18Q6ZVZ8 466 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 DDX53Q86TM3 631 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 PRPF39Q86UA1 669 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 LYSMD2Q8IV50 215 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DENND6AQ8IWF6 608 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NXPE1Q8N323 547 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ATPAF2Q8N5M1 289 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 AOPEPQ8N6M6 819 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF655Q8N720 491 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF383Q8NA42 475 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DAGLBQ8NCG7 672 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NGDNQ8NEJ9 315 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 SDR42E1Q8WUS8 393 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RNF141Q8WVD5 230 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC38A4Q969I6 547 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TM4SF18Q96CE8 201 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 C1GALT1C1Q96EU7 318 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RBM18Q96H35 190 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 EGFL8Q99944 293 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ALG1Q9BT22 464 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ALKBH7Q9BT30 221 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 KIFC3Q9BVG8 833 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TMEM168Q9H0V1 697 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CENPHQ9H3R5 247 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GLOD4Q9HC38 313 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 POLE4Q9NR33 117 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PANK4Q9NVE7 773 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ING3Q9NXR8 418 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KLHL28Q9NXS3 571 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GPRC5BQ9NZH0 403 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms