RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CRNNQ9UBG3 495 aaPredicted RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 CACNG4Q9UBN1 327 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 SNX8Q9Y5X2 465 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 PASKQ96RG2 1323 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 PCDH11YQ9BZA8 1340 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 PI4K2BG5E9Z4 385 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 O00370 1275 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 IPO8O15397 1037 aaKnown RBP2.98□□□□□ -1.93
SMC4-227ENST00000497984 GLRA3O75311 464 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 HOXD4P09016 255 aaPredicted RBP2.98□□□□□ -1.93
SMC4-227ENST00000497984 MTHFRP42898 656 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 MATR3P43243 847 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMC4-227ENST00000497984 CSNK2BP67870 215 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 GUCY2DQ02846 1103 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 HSPB3Q12988 150 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 PRKG2Q13237 762 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 RNASEH2BQ5TBB1 312 aaKnown RBP2.98□□□□□ -1.93
SMC4-227ENST00000497984 LYSMD4Q5XG99 296 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 DNAAF5Q86Y56 855 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 TMEM139Q8IV31 216 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 Q8N7P7 452 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 SYT2Q8N9I0 419 aaPredicted RBP2.98□□□□□ -1.93
SMC4-227ENST00000497984 APPL2Q8NEU8 664 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 OR6S1Q8NH40 331 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 MAPK15Q8TD08 544 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 GATAD1Q8WUU5 269 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 SSMEM1Q8WWF3 244 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 TMCO6Q96DC7 493 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 SEPHS2Q99611 448 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 OLFM1Q99784 485 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 MTMR12Q9C0I1 747 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 UBA5Q9GZZ9 404 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 TRPV4Q9HBA0 871 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 P4HTMQ9NXG6 502 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 OR6C2Q9NZP2 312 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 DAPK2Q9UIK4 370 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 PPIEQ9UNP9 301 aaKnown RBP2.98□□□□□ -1.93
SMC4-227ENST00000497984 ZNF510Q9Y2H8 683 aa2.98□□□□□ -1.93
SMC4-227ENST00000497984 C2orf81A6NN90 581 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 GJB3O75712 270 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 CDK2AP2O75956 126 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 MELTFP08582 738 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 LINGO3P0C6S8 592 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 HSPA8P11142 646 aaKnown RBP2.97□□□□□ -1.93
SMC4-227ENST00000497984 GP9P14770 177 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 PIK3R1P27986 724 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 MNDAP41218 407 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 ZFP36L2P47974 494 aaKnown RBP2.97□□□□□ -1.93
SMC4-227ENST00000497984 LMAN1P49257 510 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 ZNF75DP51815 510 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 PSMC6P62333 389 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 UBXN2AP68543 259 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 MTF1Q14872 753 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 TNIP1Q15025 636 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 SNAPC1Q16533 368 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 PHLDA2Q53GA4 152 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 SYT14P1Q58G82 188 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 SPDYCQ5MJ68 293 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 C11orf63Q6NUN7 778 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 FAM198BQ6UWH4 519 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 MAML2Q8IZL2 1156 aaPredicted RBP2.97□□□□□ -1.93
SMC4-227ENST00000497984 GPRC5AQ8NFJ5 357 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 OR1L3Q8NH93 324 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 SFXN2Q96NB2 322 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 NECTIN4Q96NY8 510 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 ZNF577Q9BSK1 485 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 OR2B2Q9GZK3 357 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 THAP2Q9H0W7 228 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 ANKZF1Q9H8Y5 726 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 TBC1D17Q9HA65 648 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 SLC35C2Q9NQQ7 365 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 CTSZQ9UBR2 303 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 DDX25Q9UHL0 483 aaKnown RBP2.97□□□□□ -1.93
SMC4-227ENST00000497984 ABT1Q9ULW3 272 aaKnown RBP2.97□□□□□ -1.93
SMC4-227ENST00000497984 CSNK1G3Q9Y6M4 447 aa2.97□□□□□ -1.93
SMC4-227ENST00000497984 PGM3O95394 542 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 BCL10O95999 233 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 IGHV2-70P01814 119 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 PFKFB1P16118 471 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 LHCGRP22888 699 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 CDH13P55290 713 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 LMOD3Q0VAK6 560 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 CA9Q16790 459 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 MTHFSDQ2M296 383 aaKnown RBP2.96□□□□□ -1.94
SMC4-227ENST00000497984 SLC35D3Q5M8T2 416 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 PRR27Q6MZM9 219 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 FRRS1Q6ZNA5 592 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 G2E3Q7L622 706 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 KCNMB4Q86W47 210 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 EID3Q8N140 333 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 OR13C3Q8NGS6 347 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 CFAP61Q8NHU2 1237 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 CHPT1Q8WUD6 406 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 TOMM40LQ969M1 308 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 SPDL1Q96EA4 605 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 URM1Q9BTM9 101 aaKnown RBP2.96□□□□□ -1.94
SMC4-227ENST00000497984 PDE7BQ9NP56 450 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 PPANQ9NQ55 473 aaKnown RBP2.96□□□□□ -1.94
SMC4-227ENST00000497984 MORF4L1Q9UBU8 362 aa2.96□□□□□ -1.94
SMC4-227ENST00000497984 CHORDC1Q9UHD1 332 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms