RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NUP210LQ5VU65 1888 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MAGEB16A2A368 324 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ZNF839A8K0R7 811 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MASP2O00187 686 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 SOCS6O14544 535 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 PHF2O75151 1096 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 NIPSNAP2O75323 286 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 SEMA7AO75326 666 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 VPS26AO75436 327 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MATN4O95460 622 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 DDAH2O95865 285 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 CATP04040 527 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 EIF2S1P05198 315 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 CXCR5P32302 372 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 RPA3P35244 121 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 HSD17B2P37059 387 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 OR1D4P47884 311 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 GLRBP48167 497 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 VPS41P49754 854 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 TERF1P54274 439 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 GPS1Q13098 491 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MRPL49Q13405 166 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ELOAQ14241 798 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 NR6A1Q15406 480 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 TRIP13Q15645 432 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MUM1Q2TAK8 710 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 EIF2S3LQ2VIR3 472 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 TUBB8Q3ZCM7 444 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 C4orf17Q53FE4 359 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 AGAP7PQ5VUJ5 663 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 NEPROQ6NW34 567 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 PRMT9Q6P2P2 845 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 SHISA6Q6ZSJ9 500 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 COX15Q7KZN9 410 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 RNF44Q7L0R7 432 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 METTL27Q8N6F8 245 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 OR9A1PQ8NGU1 263 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 SMPDL3AQ92484 453 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MIEF2Q96C03 454 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 C19orf60Q96EN9 201 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 AGAP4Q96P64 663 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 SPSB2Q99619 263 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ZFYVE21Q9BQ24 234 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 DPH7Q9BTV6 452 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MRPS30Q9NP92 439 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ASF1BQ9NVP2 202 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 INTS10Q9NVR2 710 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 CTSFQ9UBX1 484 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 ZNF282Q9UDV7 671 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 PLEKHB1Q9UF11 243 aaPredicted RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 COPG1Q9Y678 874 aaKnown RBP11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 MAU2Q9Y6X3 613 aa11.24□□□□□ -0.61
NUDCD3-211ENST00000497978 PCM1Q15154 2024 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 LOC105369274A0A096LPK9 316 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 LOC102723532A0A0G2JNH3 316 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 A0A1W2PPV9 198 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CTAGE9A4FU28 777 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 KRT87PA6NCN2 255 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 VSTM2BA6NLU5 285 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 PRPF4O43172 522 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 AVILO75366 819 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CCNDBP1O95273 360 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 KRT14P02533 472 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 PKMP14618 531 aaKnown RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 TSTA3Q13630 321 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 THOC5Q13769 683 aaKnown RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 DHX34Q14147 1143 aaKnown RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 FASTKQ14296 549 aaKnown RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 GBX1Q14549 363 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 ARHGAP19Q14CB8 494 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 KLHL38Q2WGJ6 581 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 TTLL9Q3SXZ7 439 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 FRMPD2BQ6IN97 320 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 KIRREL2Q6UWL6 708 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 Q6ZS92 163 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CILP2Q8IUL8 1156 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 TMEM151BQ8IW70 566 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 OR4N4Q8N0Y3 316 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 PPP4R1Q8TF05 950 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 COG1Q8WTW3 980 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CABS1Q96KC9 395 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 WDR77Q9BQA1 342 aaPredicted RBP11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CRB3Q9BUF7 120 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 ACAT2Q9BWD1 397 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 LHPPQ9H008 270 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CCDC68Q9H2F9 335 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 EPS8L2Q9H6S3 715 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 AGPAT4Q9NRZ5 378 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 CDC14AQ9UNH5 594 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
NUDCD3-211ENST00000497978 COL12A1Q99715 3063 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms