RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 TMEM102Q8N9M5 508 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-232ENST00000495434 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 ZNF480Q8WV37 535 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 FKBP10Q96AY3 582 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 NACC2Q96BF6 587 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 PLCD4Q9BRC7 762 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 WDR83Q9BRX9 315 aaKnown RBP13.44□□□□□ -0.26
MRPL55-232ENST00000495434 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 MRPS30Q9NP92 439 aaKnown RBP13.44□□□□□ -0.26
MRPL55-232ENST00000495434 IFT80Q9P2H3 777 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-232ENST00000495434 NDOR1Q9UHB4 597 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 ANAPC2Q9UJX6 822 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 TLK1Q9UKI8 766 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 CHMP2BQ9UQN3 213 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 MED13Q9UHV7 2174 aa13.44□□□□□ -0.26
MRPL55-232ENST00000495434 DSCR3O14972 297 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 SLC16A5O15375 505 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 ALBP02768 609 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 MCM3P25205 808 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 CASQ1P31415 396 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 RPL21P46778 160 aaKnown RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 EMP3P54852 163 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 NFKB2Q00653 900 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 ILF2Q12905 390 aaKnown RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 SP140Q13342 867 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 FBXO42Q6P3S6 717 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 SUSD1Q6UWL2 747 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 TTLL10Q6ZVT0 673 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 UBE2R2Q712K3 238 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 PRICKLE2Q7Z3G6 844 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 RAB43Q86YS6 212 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 TTC29Q8NA56 475 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 OR2Y1Q8NGV0 311 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 MCOLN3Q8TDD5 553 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 EEF1AKMT1Q8WVE0 214 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 CFAP36Q96G28 342 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 PWWP2AQ96N64 755 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 NDNQ99608 321 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 ERP44Q9BS26 406 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 TRIM31Q9BZY9 425 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 ING2Q9H160 280 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 SLC26A1Q9H2B4 701 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 CUTCQ9NTM9 273 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 MOCS1Q9NZB8 636 aa13.43□□□□□ -0.26
MRPL55-232ENST00000495434 PCDHGA9Q9Y5G4 932 aaKnown RBP13.43□□□□□ -0.26
MRPL55-232ENST00000495434 IGKV1-8A0A0C4DH67 115 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 CEACAM4O75871 244 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 SYF2O95926 243 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 IGHEP01854 428 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ALAS2P22557 587 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 HRH2P25021 359 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 IMPA1P29218 277 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 RRADP55042 308 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 CDKN2DP55273 166 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 IL2P60568 153 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PDIA2Q13087 525 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 CALCOCO2Q13137 446 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 WASHC2DQ5SRD0 308 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 HP1BP3Q5SSJ5 553 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 RBM20Q5T481 1227 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ICE2Q659A1 982 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ZNF425Q6IV72 752 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 FAM45BPQ6NSW5 357 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 TRMT10BQ6PF06 316 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PAQR3Q6TCH7 311 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PIWIL4Q7Z3Z4 852 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PAQR7Q86WK9 346 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PALM2Q8IXS6 379 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 LRRC56Q8IYG6 542 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 MYO1HQ8N1T3 1032 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 FAM45AQ8TCE6 357 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PTERQ96BW5 349 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 CCDC138Q96M89 665 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ACAT2Q9BWD1 397 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PCBD2Q9H0N5 130 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 WDR54Q9H977 334 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PARVBQ9HBI1 364 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 MLXIPLQ9NP71 852 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ZNF71Q9NQZ8 489 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 ACSS2Q9NR19 701 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 WHRNQ9P202 907 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 TAC3Q9UHF0 121 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 TP53TG5Q9Y2B4 290 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 VWA7Q9Y334 891 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 SNX24Q9Y343 169 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 PCDHGB7Q9Y5F8 929 aa13.42□□□□□ -0.26
MRPL55-232ENST00000495434 MDC1Q14676 2089 aaKnown RBP13.42□□□□□ -0.26
MRPL55-232ENST00000495434 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 HYKKA2RU49 373 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 EIF3HO15372 352 aaKnown RBP eCLIP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 ITGAXP20702 1163 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 FDXRP22570 491 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms