RNA–Protein interactions for RNA: ENST00000495083.1

MDH1-214, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-214ENST00000495083 FBXL22Q6P050 247 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 ZNF549Q6P9A3 640 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 GJB7Q6PEY0 223 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 SETD3Q86TU7 594 aaPredicted RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 PRPF39Q86UA1 669 aaKnown RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 SLC47A2Q86VL8 602 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 ZSCAN30Q86W11 494 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 MMAAQ8IVH4 418 aaKnown RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 NEK11Q8NG66 645 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 OR2T34Q8NGX1 318 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 WDR60Q8WVS4 1066 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 IGSF8Q969P0 613 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 EID2BQ96D98 161 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 PGAP3Q96FM1 320 aaPredicted RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 ZDHHC12Q96GR4 267 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 PPP1R16AQ96I34 528 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 C1orf74Q96LT6 269 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 PRICKLE1Q96MT3 831 aaPredicted RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 COG8Q96MW5 612 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 TKTL2Q9H0I9 626 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 TP63Q9H3D4 680 aaPredicted RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 C6orf106Q9H6K1 298 aaPredicted RBP4.62□□□□□ -1.67
MDH1-214ENST00000495083 SAP30LQ9HAJ7 183 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 USP29Q9HBJ7 922 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 SIX2Q9NPC8 291 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 ACP6Q9NPH0 428 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 DONSONQ9NYP3 566 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 KCND3Q9UK17 655 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 VANGL2Q9ULK5 521 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 HPCAL4Q9UM19 191 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 NEUROG3Q9Y4Z2 214 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 CFAP54Q96N23 3096 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 DOCK4Q8N1I0 1966 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 PCDH15Q96QU1 1955 aa4.62□□□□□ -1.67
MDH1-214ENST00000495083 MUC22E2RYF6 1773 aaPredicted RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 SPTBN2O15020 2390 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3DA0A087WVF3 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3IA0A087WXS9 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3EA0A087X179 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3KA0A087X1G2 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CXorf51AA0A1B0GTR3 108 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3FA6NER0 549 aaPredicted RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 OR2W5A6NFC9 320 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 FAM47DPA6NHR8 397 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SMTNL1A8MU46 457 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TTC34A8MYJ7 566 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3LB9A6J9 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 E7EVH7 732 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 F8VZ95 297 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 MCF2LO15068 1137 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 MID1O15344 667 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CALB1P05937 261 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 PROS1P07225 676 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3HP0C7X1 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CKMT1AP12532 417 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 HSD3B1P14060 373 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 MT3P25713 68 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 OR1E1P30953 314 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SDC4P31431 198 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SLC5A2P31639 672 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CDKN2AP42771 156 aaKnown RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 NSFP46459 744 aaKnown RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 PSMD8P48556 350 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CSNK1EP49674 416 aaKnown RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 CXCR3P49682 368 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CCR5P51681 352 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SGSHP51688 502 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 POLR2FP61218 127 aaKnown RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 TPM4P67936 248 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CDR2Q01850 454 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 MYL5Q02045 173 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 UBXN1Q04323 297 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 RAD51Q06609 339 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SRSF1Q07955 248 aaKnown RBP eCLIP4.61□□□□□ -1.67
MDH1-214ENST00000495083 EIF4EBP2Q13542 120 aaPredicted RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 ACOX1Q15067 660 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 KRT31Q15323 416 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 DLG2Q15700 870 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 HLA-BQ31612 363 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 C5orf22Q49AR2 442 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 PTPN20Q4JDL3 420 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 HSP90AA4PQ58FG1 418 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 FSCBQ5H9T9 825 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CCDC183Q5T5S1 534 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 UBAP2Q5T6F2 1119 aaKnown RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 C9orf64Q5T6V5 341 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TAF3Q5VWG9 929 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3CQ6IPX1 549 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 CCDC144NLQ6NUI1 221 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 NEK5Q6P3R8 708 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 LVRNQ6Q4G3 990 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 NAXDQ8IW45 347 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 TBC1D3Q8IZP1 549 aaPredicted RBP4.61□□□□□ -1.67
MDH1-214ENST00000495083 STK40Q8N2I9 435 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 WDTC1Q8N5D0 677 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 WFDC5Q8TCV5 224 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 NT5C3BQ969T7 300 aa4.61□□□□□ -1.67
MDH1-214ENST00000495083 BIRC7Q96CA5 298 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms