RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 MAGEC3Q8TD91 643 aa21.09■□□□□ 0.97
HDDC3-203ENST00000494993 THOC3Q96J01 351 aaKnown RBP21.09■□□□□ 0.97
HDDC3-203ENST00000494993 BFARQ9NZS9 450 aa21.09■□□□□ 0.97
HDDC3-203ENST00000494993 ZC3H7BQ9UGR2 993 aaKnown RBP21.09■□□□□ 0.97
HDDC3-203ENST00000494993 GUCA1BQ9UMX6 200 aa21.09■□□□□ 0.97
HDDC3-203ENST00000494993 LOC105369274A0A096LPK9 316 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 LOC102723532A0A0G2JNH3 316 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 ARNTP27540 789 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 OCA2Q04671 838 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 KLC1Q07866 573 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 Q0VFX4 171 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 ZNF169Q14929 603 aaPredicted RBP21.08■□□□□ 0.97
HDDC3-203ENST00000494993 CCNG2Q16589 344 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 B3GNTL1Q67FW5 361 aaPredicted RBP21.08■□□□□ 0.97
HDDC3-203ENST00000494993 C4orf22Q6V702 233 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 OR4N4Q8N0Y3 316 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 OTUD6BQ8N6M0 293 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 GRHL3Q8TE85 626 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 CNDP1Q96KN2 507 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 BIRC8Q96P09 236 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 MESP1Q9BRJ9 268 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 TSGA10Q9BZW7 698 aa21.08■□□□□ 0.97
HDDC3-203ENST00000494993 ZNF282Q9UDV7 671 aaPredicted RBP21.08■□□□□ 0.97
HDDC3-203ENST00000494993 OR2A25A4D2G3 310 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 AP3B1O00203 1094 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 E2F3O00716 465 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 HPP00738 406 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 ZGLP1P0C6A0 271 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 CDC16Q13042 620 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 FASTKQ14296 549 aaKnown RBP21.07■□□□□ 0.96
HDDC3-203ENST00000494993 GBX1Q14549 363 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 NAA25Q14CX7 972 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 DRICH1Q6PGQ1 229 aaPredicted RBP21.07■□□□□ 0.96
HDDC3-203ENST00000494993 ISLR2Q6UXK2 745 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 LPGAT1Q92604 370 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 MIEF2Q96C03 454 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 MFSD3Q96ES6 412 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 C10orf90Q96M02 699 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 ZFYVE21Q9BQ24 234 aa21.07■□□□□ 0.96
HDDC3-203ENST00000494993 TSR3Q9UJK0 312 aaKnown RBP21.07■□□□□ 0.96
HDDC3-203ENST00000494993 DRG1Q9Y295 367 aaKnown RBP21.07■□□□□ 0.96
HDDC3-203ENST00000494993 MAP2K7O14733 419 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 NIPSNAP2O75323 286 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 VAPBO95292 243 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 MATN4O95460 622 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 EIF2S1P05198 315 aaKnown RBP21.06■□□□□ 0.96
HDDC3-203ENST00000494993 ACPPP15309 386 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 MGAT1P26572 445 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 ATP5DP30049 168 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 CMPK1P30085 196 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 FMO4P31512 558 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 YBX1P67809 324 aaKnown RBP21.06■□□□□ 0.96
HDDC3-203ENST00000494993 TLR1Q15399 786 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 RPS6KA1Q15418 735 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 TYSND1Q2T9J0 566 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 MUM1Q2TAK8 710 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 MEI1Q5TIA1 1274 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 MRNIPQ6NTE8 343 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 PRSS58Q8IYP2 241 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 SPC24Q8NBT2 197 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 FAR1Q8WVX9 515 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 DPH7Q9BTV6 452 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 KIFC1Q9BW19 673 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 ZNF160Q9HCG1 818 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 SYBUQ9NX95 663 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 STOX2Q9P2F5 926 aaPredicted RBP21.06■□□□□ 0.96
HDDC3-203ENST00000494993 C3orf18Q9UK00 162 aa21.06■□□□□ 0.96
HDDC3-203ENST00000494993 IGLV3-12A0A075B6K2 115 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 H3BMM5 538 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 ERVK-10P10266 1014 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 ERGP11308 486 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 FBLP22087 321 aaKnown RBP21.05■□□□□ 0.96
HDDC3-203ENST00000494993 CDC25BP30305 580 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 MFAP5Q13361 173 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 PRTGQ2VWP7 1150 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 RNF187Q5TA31 235 aaPredicted RBP21.05■□□□□ 0.96
HDDC3-203ENST00000494993 FBXO42Q6P3S6 717 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 CES3Q6UWW8 571 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 LINC00696Q6ZRV3 163 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 SDCCAG8Q86SQ7 713 aaPredicted RBP21.05■□□□□ 0.96
HDDC3-203ENST00000494993 OR9A1PQ8NGU1 263 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 C8orf44Q96CB5 159 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 LMF1Q96S06 567 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 ACAT2Q9BWD1 397 aa21.05■□□□□ 0.96
HDDC3-203ENST00000494993 SCN2AQ99250 2005 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 ARHGEF33A8MVX0 844 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 GOLGA8KD6RF30 607 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 H0YGG7 62 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 GOLGA8TH3BQL2 631 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 PFDN6O15212 129 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 KLHL18O94889 574 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 ESR1P03372 595 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 EDN3P14138 238 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 EMP3P54852 163 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 ARF3P61204 181 aaPredicted RBP21.04■□□□□ 0.96
HDDC3-203ENST00000494993 ANKRD20A4Q4UJ75 823 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 VWA2Q5GFL6 755 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.04■□□□□ 0.96
HDDC3-203ENST00000494993 ATG9BQ674R7 924 aa21.04■□□□□ 0.96
HDDC3-203ENST00000494993 LRRC8BQ6P9F7 803 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms