RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MANBAO00462 879 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 FCHO1O14526 889 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 PRAMEF4O60810 478 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 ULK1O75385 1050 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 CCNDBP1O95273 360 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 LINC00032P0C843 101 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 SP9P0CG40 484 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 C1GALT1C1LP0DN25 315 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 RXRGP48443 463 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 NUBP1P53384 320 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 IRX1P78414 480 aaPredicted RBP10.65□□□□□ -0.7
PKP4-215ENST00000494945 DOC2AQ14183 400 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 ANGPT1Q15389 498 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 CPSF6Q16630 551 aaKnown RBP eCLIP10.65□□□□□ -0.7
PKP4-215ENST00000494945 PAGE2BQ5JRK9 111 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 C10orf62Q5T681 223 aaPredicted RBP10.65□□□□□ -0.7
PKP4-215ENST00000494945 PRAMEF9Q5VWM5 478 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 IL27RAQ6UWB1 636 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 LARP4Q71RC2 724 aaKnown RBP eCLIP10.65□□□□□ -0.7
PKP4-215ENST00000494945 TRIM46Q7Z4K8 759 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 YTHDF3Q7Z739 585 aaKnown RBP10.65□□□□□ -0.7
PKP4-215ENST00000494945 CLNKQ7Z7G1 428 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 AMIGO1Q86WK6 493 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 C17orf64Q86WR6 236 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 SYT12Q8IV01 421 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 NAGSQ8N159 534 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 SLC37A2Q8TED4 501 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 SH3KBP1Q96B97 665 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 REPS1Q96D71 796 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 ERP27Q96DN0 273 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 C3orf30Q96M34 536 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 TWSG1Q9GZX9 223 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 ELOVL6Q9H5J4 265 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 PELI2Q9HAT8 420 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 BTRCQ9Y297 605 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 PCDHGA11Q9Y5H2 935 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 CSNK1G3Q9Y6M4 447 aa10.65□□□□□ -0.7
PKP4-215ENST00000494945 RP1P56715 2156 aa10.65□□□□□ -0.71
PKP4-215ENST00000494945 TRBV23OR9-2A0A075B6M9 112 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PRAMEF33A0A0G2JMD5 474 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 B4DGG1 531 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 E9PBE3 544 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 FFAR3O14843 346 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SLC22A2O15244 555 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 YY2O15391 372 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 GPR42O15529 346 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 RGS14O43566 566 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PRICKLE3O43900 615 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 KLHL41O60662 606 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ANXA6P08133 673 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PRR35P0CG20 571 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 FASLGP48023 281 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ARRB1P49407 418 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 HTR6P50406 440 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ABATP80404 500 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PRDX1Q06830 199 aaKnown RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 SIM2Q14190 667 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 GPR18Q14330 331 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ABRAXAS2Q15018 415 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PLCL1Q15111 1095 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 HIST2H2ACQ16777 129 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 DUOXA1Q1HG43 343 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 KIF19Q2TAC6 998 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TCHHL1Q5QJ38 904 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 FRG2Q64ET8 278 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ICE2Q659A1 982 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 HIST2H2AA3Q6FI13 130 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 OGFOD2Q6N063 350 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 CHSY3Q70JA7 882 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TMPRSS11BQ86T26 416 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 C17orf82Q86X59 251 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 C2orf73Q8N5S3 287 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 ABHD11Q8NFV4 315 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 CEP76Q8TAP6 659 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SELENOMQ8WWX9 145 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 PIGKQ92643 395 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 UBE2E3Q969T4 207 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SLC22A18Q96BI1 424 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TUBGCP3Q96CW5 907 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 FRG2BQ96QU4 278 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ELF4Q99607 663 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 PITHD1Q9GZP4 211 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 NMUR2Q9GZQ4 415 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SRMSQ9H3Y6 488 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 XKR8Q9H6D3 395 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 CAAP1Q9H8G2 361 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 AKTIPQ9H8T0 292 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 UCK1Q9HA47 277 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SAR1AQ9NR31 198 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TAC3Q9UHF0 121 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 ZNF490Q9ULM2 529 aaPredicted RBP10.64□□□□□ -0.71
PKP4-215ENST00000494945 SH2B3Q9UQQ2 575 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 TSC22D4Q9Y3Q8 395 aa10.64□□□□□ -0.71
PKP4-215ENST00000494945 SNX11Q9Y5W9 270 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms