RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 WDR83Q9BRX9 315 aaKnown RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 DPH7Q9BTV6 452 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 TRIM54Q9BYV2 358 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 SEMA4CQ9C0C4 833 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 SLC25A18Q9H1K4 315 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 PARVBQ9HBI1 364 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 PLAC1Q9HBJ0 212 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 SAYSD1Q9NPB0 183 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 IFT80Q9P2H3 777 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 TXNDC16Q9P2K2 825 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 TCFL5Q9UL49 500 aa16.93■□□□□ 0.3
HDAC4-211ENST00000494800 HEMK1Q9Y5R4 338 aaPredicted RBP16.93■□□□□ 0.3
HDAC4-211ENST00000494800 H3BMH7 237 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 URI1O94763 535 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-211ENST00000494800 TUBB4AP04350 444 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 PRDX1Q06830 199 aaKnown RBP16.92■□□□□ 0.3
HDAC4-211ENST00000494800 FASTKD3Q14CZ7 662 aaKnown RBP16.92■□□□□ 0.3
HDAC4-211ENST00000494800 MLIPQ5VWP3 458 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 ICE2Q659A1 982 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 C8orf74Q6P047 294 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 FAM198BQ6UWH4 519 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF605Q86T29 641 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 RUFY1Q96T51 708 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 ZFYVE21Q9BQ24 234 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 PHACTR1Q9C0D0 580 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 PCBD2Q9H0N5 130 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 CCDC177Q9NQR7 707 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-211ENST00000494800 ABCF3Q9NUQ8 709 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 MOCS1Q9NZB8 636 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 SLC17A6Q9P2U8 582 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 DHCR7Q9UBM7 475 aaKnown RBP16.92■□□□□ 0.3
HDAC4-211ENST00000494800 TAC3Q9UHF0 121 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 KCNMB2Q9Y691 235 aa16.92■□□□□ 0.3
HDAC4-211ENST00000494800 A0A1B0GX78 115 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 E7ENX8 843 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 FDXRP22570 491 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 CCND1P24385 295 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 PLTPP55058 493 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 VSX2P58304 361 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-211ENST00000494800 TAP2Q03519 686 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 NFATC3Q12968 1075 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 WHAMMP3Q1A5X7 153 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 NKAIN1Q4KMZ8 207 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 LCN10Q6JVE6 187 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 TTLL10Q6ZVT0 673 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 ADCK2Q7Z695 626 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 RAB43Q86YS6 212 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 PPFIBP2Q8ND30 876 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 C9orf43Q8TAL5 461 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 VPS39Q96JC1 886 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 GBP5Q96PP8 586 aa16.91■□□□□ 0.3
HDAC4-211ENST00000494800 SMG1Q96Q15 3661 aaKnown RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 A0A0J9YVX5 310 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 OR2A25A4D2G3 310 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 B8ZZF3 427 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 MKRN2OSH3BPM6 223 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 KIF2AO00139 706 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 CTSVO60911 334 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 RFPL1O75677 317 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 EIF2S1P05198 315 aaKnown RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 GSTA2P09210 222 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 FURINP09958 794 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 EZRP15311 586 aaKnown RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 SAT1P21673 171 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 HRH2P25021 359 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 IMPA1P29218 277 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 PMS2P54278 862 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 SLC12A2P55011 1212 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 COL9A2Q14055 689 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 WASHC2DQ5SRD0 308 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 ZNF385CQ66K41 422 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 RNF44Q7L0R7 432 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 RERGQ96A58 199 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-211ENST00000494800 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 ENAMQ9NRM1 1142 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 STARD5Q9NSY2 213 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 CUTCQ9NTM9 273 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 GRHL1Q9NZI5 618 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 PDE10AQ9Y233 779 aa16.9■□□□□ 0.3
HDAC4-211ENST00000494800 FAM95CA0A1B0GW59 222 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 FITM1A5D6W6 292 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 TXNDC9O14530 226 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 DSCR3O14972 297 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 CAPN1P07384 714 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 CTSBP07858 339 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ENO2P09104 434 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ATXN8OSP0DMR3 200 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 FOLR3P41439 243 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 AP1S2P56377 157 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 IL10RAQ13651 578 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ZC3HC1Q86WB0 502 aaKnown RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 CCDC25Q86WR0 208 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 APLFQ8IW19 511 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 NKAPQ8N5F7 415 aaKnown RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 MNS1Q8NEH6 495 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms