RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZC3H7BQ9UGR2 993 aaKnown RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 POLEQ07864 2286 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 LOC105369274A0A096LPK9 316 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 LOC102723532A0A0G2JNH3 316 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 OR2A25A4D2G3 310 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 KRT87PA6NCN2 255 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 H3BMM5 538 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 PFDN6O15212 129 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 VAPBO95292 243 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 MED26O95402 600 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 MATN4O95460 622 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 HPP00738 406 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 ARNTP27540 789 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 CMPK1P30085 196 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 CDC25BP30305 580 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 KLC1Q07866 573 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 GBX1Q14549 363 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 TLR1Q15399 786 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 MUM1Q2TAK8 710 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 RNF187Q5TA31 235 aaPredicted RBP22.18■■□□□ 1.14
COL27A1-208ENST00000494780 MEI1Q5TIA1 1274 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 OR4N4Q8N0Y3 316 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 DTWD1Q8N5C7 304 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 ZFYVE21Q9BQ24 234 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 ZKSCAN5Q9Y2L8 839 aa22.18■■□□□ 1.14
COL27A1-208ENST00000494780 NRP2O60462 931 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 ZGLP1P0C6A0 271 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 ERVK-10P10266 1014 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 ACPPP15309 386 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 COL8A1P27658 744 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 FMO4P31512 558 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 EMP3P54852 163 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 CDK16Q00536 496 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 Q0VFX4 171 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 TYSND1Q2T9J0 566 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 ZNF787Q6DD87 383 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 ISLR2Q6UXK2 745 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 SPC24Q8NBT2 197 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 LPGAT1Q92604 370 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 MFSD3Q96ES6 412 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 CNDP1Q96KN2 507 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 LMF1Q96S06 567 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 TCF12Q99081 682 aa22.17■■□□□ 1.14
COL27A1-208ENST00000494780 IGLV3-12A0A075B6K2 115 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 MAP2K7O14733 419 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 PHF2O75151 1096 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 ESR1P03372 595 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 EIF2S1P05198 315 aaKnown RBP22.16■■□□□ 1.14
COL27A1-208ENST00000494780 ERGP11308 486 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 MGAT1P26572 445 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 DCTP40126 519 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 ADARP55265 1226 aaKnown RBP22.16■■□□□ 1.14
COL27A1-208ENST00000494780 CDC16Q13042 620 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 MFAP5Q13361 173 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 FASTKQ14296 549 aaKnown RBP22.16■■□□□ 1.14
COL27A1-208ENST00000494780 ANKRD20A4Q4UJ75 823 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 FBXO42Q6P3S6 717 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 LRRC8BQ6P9F7 803 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 GSTA5Q7RTV2 222 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 OR9A1PQ8NGU1 263 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 GRHL3Q8TE85 626 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 FAR1Q8WVX9 515 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 DPH7Q9BTV6 452 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 SYBUQ9NX95 663 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 C3orf18Q9UK00 162 aa22.16■■□□□ 1.14
COL27A1-208ENST00000494780 MDC1Q14676 2089 aaKnown RBP22.15■■□□□ 1.14
COL27A1-208ENST00000494780 E2F3O00716 465 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 NIPSNAP2O75323 286 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 EDN3P14138 238 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 TPSB2P20231 275 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 FBLP22087 321 aaKnown RBP22.15■■□□□ 1.14
COL27A1-208ENST00000494780 TPSAB1Q15661 275 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 PRTGQ2VWP7 1150 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 ATG9BQ674R7 924 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 CES3Q6UWW8 571 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 MAIP1Q8WWC4 291 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 SMPDL3AQ92484 453 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 C10orf90Q96M02 699 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 ZNF160Q9HCG1 818 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 SOX13Q9UN79 622 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 CDC14AQ9UNH5 594 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 CNTRLQ7Z7A1 2325 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 MYO9AB2RTY4 2548 aa22.15■■□□□ 1.14
COL27A1-208ENST00000494780 ARHGEF33A8MVX0 844 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 GOLGA8KD6RF30 607 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 H0YGG7 62 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 GOLGA8TH3BQL2 631 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 PRPF4O43172 522 aaKnown RBP eCLIP22.14■■□□□ 1.135e-8■■□□□ 14.1
COL27A1-208ENST00000494780 VPS26AO75436 327 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 CHRM3P20309 590 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 ARF3P61204 181 aaPredicted RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 YBX1P67809 324 aaKnown RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 ARHGAP19Q14CB8 494 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 KIAA0930Q6ICG6 404 aaPredicted RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 RPUSD3Q6P087 351 aaKnown RBP22.14■■□□□ 1.13
COL27A1-208ENST00000494780 LINC00696Q6ZRV3 163 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 GAS2L3Q86XJ1 694 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 KBTBD2Q8IY47 623 aa22.14■■□□□ 1.13
COL27A1-208ENST00000494780 PRSS58Q8IYP2 241 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms