RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CUTCQ9NTM9 273 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 TAS2R13Q9NYV9 303 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 TAC3Q9UHF0 121 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 SPTA1P02549 2419 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 SEC16AO15027 2179 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 A0A1B0GX78 115 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 AHSGP02765 367 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 MRPS25P82663 173 aaKnown RBP31.81■■■□□ 2.68
CBX4-203ENST00000494546 NAA25Q14CX7 972 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 RBM20Q5T481 1227 aaKnown RBP31.81■■■□□ 2.68
CBX4-203ENST00000494546 FRMPD2BQ6IN97 320 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 KIAA0408Q6ZU52 694 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 RAB43Q86YS6 212 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 LRRC39Q96DD0 335 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 ZNF285Q96NJ3 590 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 TEX264Q9Y6I9 313 aa31.81■■■□□ 2.68
CBX4-203ENST00000494546 EIF3FO00303 357 aaPredicted RBP31.8■■■□□ 2.68
CBX4-203ENST00000494546 SRPX2O60687 465 aaPredicted RBP31.8■■■□□ 2.68
CBX4-203ENST00000494546 FOLR3P41439 243 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 TIAL1Q01085 375 aaKnown RBP eCLIP31.8■■■□□ 2.68
CBX4-203ENST00000494546 WASHC2DQ5SRD0 308 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 TEDDM1Q5T9Z0 273 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 TRMT10BQ6PF06 316 aaKnown RBP31.8■■■□□ 2.68
CBX4-203ENST00000494546 ASB18Q6ZVZ8 466 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 ANKMY2Q8IV38 441 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 EEF1AKMT1Q8WVE0 214 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 SNX24Q9Y343 169 aa31.8■■■□□ 2.68
CBX4-203ENST00000494546 FER1L5A0AVI2 2057 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 LOC105369274A0A096LPK9 316 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 LOC102723532A0A0G2JNH3 316 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 OR2A25A4D2G3 310 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 DSCR3O14972 297 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 EIF2S1P05198 315 aaKnown RBP31.79■■■□□ 2.68
CBX4-203ENST00000494546 CD63P08962 238 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 SKIV2L2P42285 1042 aaKnown RBP31.79■■■□□ 2.68
CBX4-203ENST00000494546 RGS4P49798 205 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 CDKN2DP55273 166 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 FOXL2P58012 376 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 ATP1A4Q13733 1029 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 YOD1Q5VVQ6 348 aaPredicted RBP31.79■■■□□ 2.68
CBX4-203ENST00000494546 RNF44Q7L0R7 432 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 OR4N4Q8N0Y3 316 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 ZFYVE21Q9BQ24 234 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 SLC22A11Q9NSA0 550 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 ANAPC2Q9UJX6 822 aa31.79■■■□□ 2.68
CBX4-203ENST00000494546 HELZ2Q9BYK8 2649 aaKnown RBP31.78■■■□□ 2.68
CBX4-203ENST00000494546 E7ENX8 843 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 CNOT3O75175 753 aaKnown RBP31.78■■■□□ 2.68
CBX4-203ENST00000494546 ITGAXP20702 1163 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 RPL21P46778 160 aaKnown RBP31.78■■■□□ 2.68
CBX4-203ENST00000494546 TAP2Q03519 686 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 SSPNQ14714 243 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 COLEC12Q5KU26 742 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 ICE2Q659A1 982 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 STEAP4Q687X5 459 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 LRRC8EQ6NSJ5 796 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 MRPL14Q6P1L8 145 aaKnown RBP31.78■■■□□ 2.68
CBX4-203ENST00000494546 PAQR3Q6TCH7 311 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 OR2Y1Q8NGV0 311 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 PLCD4Q9BRC7 762 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 SLC25A23Q9BV35 468 aa31.78■■■□□ 2.68
CBX4-203ENST00000494546 TP73O15350 636 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 CCNDBP1O95273 360 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 ZIC2O95409 532 aaPredicted RBP31.77■■■□□ 2.68
CBX4-203ENST00000494546 CASQ1P31415 396 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 PRDX1Q06830 199 aaKnown RBP31.77■■■□□ 2.68
CBX4-203ENST00000494546 PDIA2Q13087 525 aaKnown RBP31.77■■■□□ 2.68
CBX4-203ENST00000494546 FAM214AQ32MH5 1076 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 THEMIS2Q5TEJ8 643 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 FBXO42Q6P3S6 717 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 GALNT7Q86SF2 657 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 METTL27Q8N6F8 245 aaPredicted RBP31.77■■■□□ 2.68
CBX4-203ENST00000494546 GPATCH11Q8N954 259 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 ANKMY1Q9P2S6 941 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 ADAMTS6Q9UKP5 1117 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 BSNQ9UPA5 3926 aa31.77■■■□□ 2.68
CBX4-203ENST00000494546 HYKKA2RU49 373 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 FITM1A5D6W6 292 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 PDGFAP04085 211 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 PIM1P11309 404 aaPredicted RBP31.76■■■□□ 2.67
CBX4-203ENST00000494546 TLE1Q04724 770 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 MRGPREQ86SM8 312 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 PALM2Q8IXS6 379 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 MYO1HQ8N1T3 1032 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 ZDHHC19Q8WVZ1 309 aaPredicted RBP31.76■■■□□ 2.67
CBX4-203ENST00000494546 EPN3Q9H201 632 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 ENAMQ9NRM1 1142 aa31.76■■■□□ 2.67
CBX4-203ENST00000494546 IGKV1-8A0A0C4DH67 115 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 IMPA1P29218 277 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 RRADP55042 308 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 KLRB1Q12918 225 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 PDAP1Q13442 181 aaKnown RBP31.75■■■□□ 2.67
CBX4-203ENST00000494546 FASTKD3Q14CZ7 662 aaKnown RBP31.75■■■□□ 2.67
CBX4-203ENST00000494546 MED25Q71SY5 747 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 ADCK2Q7Z695 626 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 PAQR7Q86WK9 346 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 LRRC56Q8IYG6 542 aaPredicted RBP31.75■■■□□ 2.67
CBX4-203ENST00000494546 DTWD1Q8N5C7 304 aa31.75■■■□□ 2.67
CBX4-203ENST00000494546 TMEM102Q8N9M5 508 aaPredicted RBP31.75■■■□□ 2.67
CBX4-203ENST00000494546 TEX19Q8NA77 164 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 303.2 ms