RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PRPS2P11908 318 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 AMD1P17707 334 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 CAPN3P20807 821 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 IDSP22304 550 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ITPKAP23677 461 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 PBLDP30039 288 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 HMOX2P30519 316 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 MAT2AP31153 395 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 AKT2P31751 481 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 DPP6P42658 865 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 RABIFP47224 123 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CPA2P48052 419 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CLDN8P56748 225 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CLDN2P57739 230 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TBPL1P62380 186 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 IRF8Q02556 426 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KCNC4Q03721 635 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FOXM1Q08050 763 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TBL3Q12788 808 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 MTAPQ13126 283 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 RPE65Q16518 533 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CPSF6Q16630 551 aaKnown RBP eCLIP6.56□□□□□ -1.36
MSH5-217ENST00000494458 AGKQ53H12 422 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 IL23RQ5VWK5 629 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 NXPE4Q6UWF7 544 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 C16orf89Q6UX73 402 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KIAA1324Q6UXG2 1013 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 GK5Q6ZS86 529 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 NET1Q7Z628 596 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 IQCHQ86VS3 1027 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 CACUL1Q86Y37 369 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 DCP2Q8IU60 420 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 SCUBE1Q8IWY4 988 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ULK2Q8IYT8 1036 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FAM9CQ8IZT9 166 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SLC22A18ASQ8N1D0 253 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FBXW8Q8N3Y1 598 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 DCBLD1Q8N8Z6 715 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 LINC01555Q8NAE3 123 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 GLB1L3Q8NCI6 653 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 OR7G3Q8NG95 312 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 OR9I1Q8NGQ6 314 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 OR2A1Q8NGT9 310 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 OR2L8Q8NGY9 312 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 GANCQ8TET4 914 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SKA2Q8WVK7 121 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 HMGB4Q8WW32 186 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TESCQ96BS2 214 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 BIRC7Q96CA5 298 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ERLEC1Q96DZ1 483 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TOE1Q96GM8 510 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 CAMK1GQ96NX5 476 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 OR2M4Q96R27 311 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 HOPXQ9BPY8 73 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 HAUS8Q9BT25 410 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TRIT1Q9H3H1 467 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 CLMPQ9H6B4 373 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 PELI2Q9HAT8 420 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 LRTM1Q9HBL6 345 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 FZD3Q9NPG1 666 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 GEMIN8Q9NWZ8 242 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 CCDC167Q9P0B6 97 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 DLGAP2Q9P1A6 1054 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TMEM181Q9P2C4 612 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KLQ9UEF7 1012 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ZNHIT2Q9UHR6 403 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ADGRE2Q9UHX3 823 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KLF15Q9UIH9 416 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TSR3Q9UJK0 312 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 ASF1AQ9Y294 204 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 PLEKHM1Q9Y4G2 1056 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 KLK4Q9Y5K2 254 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 ZFC3H1O60293 1989 aaKnown RBP6.56□□□□□ -1.36
MSH5-217ENST00000494458 ANKRD12Q6UB98 2062 aa6.56□□□□□ -1.36
MSH5-217ENST00000494458 TRBV5-3A0A0A0MS03 114 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PABPN1LA6NDY0 278 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 A8MUI8 341 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 H0Y8X5 98 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 K7ESF4 209 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 ACOT8O14734 319 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SCN2BO60939 215 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 ATP6V1G2O95670 118 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 MTHFD1P11586 935 aaKnown RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 BCKDHAP12694 445 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 ACP5P13686 325 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 HOXB9P17482 250 aaPredicted RBP6.55□□□□□ -1.36
MSH5-217ENST00000494458 HTR1BP28222 390 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 NDUFS1P28331 727 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 PKLRP30613 574 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 SERPINB1P30740 379 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 RAB28P51157 221 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 NEK2P51955 445 aa6.55□□□□□ -1.36
MSH5-217ENST00000494458 POLR2JP52435 117 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms