RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	TSN	Q15631	228 aa	Known RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	PPP1R3A	Q16821	1122 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	C18orf21	Q32NC0	220 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	LRRC8E	Q6NSJ5	796 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	CACNA2D3	Q8IZS8	1091 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	DNAJC22	Q8N4W6	341 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	RAB42	Q8N4Z0	105 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	TCTN2	Q96GX1	697 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	ZPBP	Q9BS86	351 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	SPRTN	Q9H040	489 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	EPB41L4B	Q9H329	900 aa		11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957		V9GYY5	206 aa	Predicted RBP	11.2	□□□□□ -0.62
UBA3-211	ENST00000493957	NUP210L	Q5VU65	1888 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC16A5	O15375	505 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	SCRG1	O75711	98 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC35E2B	P0CK96	405 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	CCDC166	P0CW27	439 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	LIF	P15018	202 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	STMN1	P16949	149 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	PHB	P35232	272 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC12A2	P55011	1212 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	IRF9	Q00978	393 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	GPS2	Q13227	327 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	NAE1	Q13564	534 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	CSHL1	Q14406	222 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	OR4D1	Q15615	310 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	MROH9	Q5TGP6	573 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	ICE2	Q659A1	982 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	LCN10	Q6JVE6	187 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	AGTRAP	Q6RW13	159 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	CEP128	Q6ZU80	1094 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	TMEM126B	Q8IUX1	230 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	NLGN4X	Q8N0W4	816 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	NKAP	Q8N5F7	415 aa	Known RBP	11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	MCOLN3	Q8TDD5	553 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC22A18	Q96BI1	424 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	ALKBH8	Q96BT7	664 aa	Known RBP	11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	PTER	Q96BW5	349 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	PYCR2	Q96C36	320 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	PDLIM5	Q96HC4	596 aa	Known RBP	11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	RUFY1	Q96T51	708 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	CYTH2	Q99418	400 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	DPH7	Q9BTV6	452 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	DPH1	Q9BZG8	443 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	POPDC3	Q9HBV1	291 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	STARD5	Q9NSY2	213 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	CHD6	Q8TD26	2715 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	PCSK5	Q92824	1860 aa		11.19	□□□□□ -0.62
UBA3-211	ENST00000493957	OR2A25	A4D2G3	310 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	POC1B-GALNT4	F8VUJ3	575 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	MSL3P1	P0C860	447 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CD1D	P15813	335 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	F8A1	P23610	371 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	GCA	P28676	217 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CMPK1	P30085	196 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	DEK	P35659	375 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CSRP3	P50461	194 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	ITGA1	P56199	1179 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	RAB10	P61026	200 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CXADR	P78310	365 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	FBXO48	Q5FWF7	155 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	MANEA	Q5SRI9	462 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	THEMIS2	Q5TEJ8	643 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	ARHGAP40	Q5TG30	622 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	PRAMEF13	Q5VWM6	474 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	FRMPD2B	Q6IN97	320 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	DTWD1	Q8N5C7	304 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	IL22RA1	Q8N6P7	574 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	DCAKD	Q8WVC6	231 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	KCTD4	Q8WVF5	259 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	SLC44A1	Q8WWI5	657 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	TSPAN17	Q96FV3	270 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	MED8	Q96G25	268 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CCDC138	Q96M89	665 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	OR4K3	Q96R72	315 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CCNL2	Q96S94	520 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	PAFAH2	Q99487	392 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	DERL2	Q9GZP9	239 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	TSPYL1	Q9H0U9	437 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	FANCE	Q9HB96	536 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	SYTL2	Q9HCH5	934 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	MRPS30	Q9NP92	439 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	IGSF5	Q9NSI5	407 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	ARL15	Q9NXU5	204 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	EURL	Q9NYK6	297 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	CTNNAL1	Q9UBT7	734 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	IL17B	Q9UHF5	180 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	RALY	Q9UKM9	306 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	MRPS18B	Q9Y676	258 aa	Known RBP	11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	IGSF10	Q6WRI0	2623 aa		11.18	□□□□□ -0.62
UBA3-211	ENST00000493957	FAM208B	Q5VWN6	2430 aa		11.17	□□□□□ -0.62

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