RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TNFRSF12AQ9NP84 129 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CUEDC1Q9NWM3 386 aaPredicted RBP18.69■□□□□ 0.58
USP39-218ENST00000493829 PCDHB11Q9Y5F2 797 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 IGHV1OR21-1A0A087WYE8 117 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 C2orf74A8MZ97 194 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CLGNO14967 610 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 VIMP08670 466 aaKnown RBP18.69■□□□□ 0.58
USP39-218ENST00000493829 CKMT1AP12532 417 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CATSPEREQ5SY80 951 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 ICE2Q659A1 982 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 ADCK2Q7Z695 626 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 SPRED1Q7Z699 444 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 SYVN1Q86TM6 617 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CUZD1Q86UP6 607 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 OR2A1Q8NGT9 310 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 SLC5A11Q8WWX8 675 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 NCSTNQ92542 709 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 KCNA7Q96RP8 456 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 SORT1Q99523 831 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 CCDC3Q9BQI4 270 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 ACTR8Q9H981 624 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 MARCOQ9UEW3 520 aaPredicted RBP18.69■□□□□ 0.58
USP39-218ENST00000493829 KCNE2Q9Y6J6 123 aa18.69■□□□□ 0.58
USP39-218ENST00000493829 EME2A4GXA9 379 aaPredicted RBP18.68■□□□□ 0.58
USP39-218ENST00000493829 TMEM233B4DJY2 109 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 KLF11O14901 512 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 SNNO75324 88 aaPredicted RBP18.68■□□□□ 0.58
USP39-218ENST00000493829 MLYCDO95822 493 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 VARSP26640 1264 aaKnown RBP18.68■□□□□ 0.58
USP39-218ENST00000493829 EPHA4P54764 986 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 GFERP55789 205 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 SH3BP2P78314 561 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 MEF2AQ02078 507 aaPredicted RBP18.68■□□□□ 0.58
USP39-218ENST00000493829 TRAF3Q13114 568 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 SLC14A1Q13336 389 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 KIR2DS3Q14952 304 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 XKR6Q5GH73 641 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 SH2D4BQ5SQS7 431 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 METTL2BQ6P1Q9 378 aaKnown RBP18.68■□□□□ 0.58
USP39-218ENST00000493829 DBX2Q6ZNG2 339 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 GPRIN3Q6ZVF9 776 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 C17orf64Q86WR6 236 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 ZNF781Q8N8C0 355 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 OR2L3Q8NG85 312 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 OR4F6Q8NGB9 312 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 AGAP11Q8TF27 550 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 NAT6Q93015 286 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 TGM7Q96PF1 710 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 OR2A14Q96R47 310 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 HAUS8Q9BT25 410 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 SLC6A20Q9NP91 592 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 KLHL3Q9UH77 587 aa18.68■□□□□ 0.58
USP39-218ENST00000493829 GOLGA4Q13439 2230 aaKnown RBP18.67■□□□□ 0.58
USP39-218ENST00000493829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.67■□□□□ 0.58
USP39-218ENST00000493829 GIPC1O14908 333 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 B4GAT1O43505 415 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 DUX1O43812 170 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 PRICKLE3O43900 615 aaPredicted RBP18.67■□□□□ 0.58
USP39-218ENST00000493829 NRP2O60462 931 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 PRAMEF4O60810 478 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 OR4F21O95013 312 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 OTCP00480 354 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 KITP10721 976 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 PVRP15151 417 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 GNAZP19086 355 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 LSP1P33241 339 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 OCRLQ01968 901 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 IRF8Q02556 426 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 CHIT1Q13231 466 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 CCDC157Q569K6 752 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 STPG1Q5TH74 334 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 PRAMEF9Q5VWM5 478 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 KIAA1614Q5VZ46 1190 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 LETMD1Q6P1Q0 360 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 SPESP1Q6UW49 350 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 FAM92BQ6ZTR7 304 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 USP53Q70EK8 1073 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 FLVCR1-AS1Q8TAF5 88 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 ZNF382Q96SR6 550 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 TRMOQ9BU70 441 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 PCBD2Q9H0N5 130 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 RABEP2Q9H5N1 569 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 MRPS30Q9NP92 439 aaKnown RBP18.67■□□□□ 0.58
USP39-218ENST00000493829 THAP1Q9NVV9 213 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 ADAM21Q9UKJ8 722 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 RNF11Q9Y3C5 154 aa18.67■□□□□ 0.58
USP39-218ENST00000493829 CRCPO75575 148 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 RPLP0P05388 317 aaKnown RBP18.66■□□□□ 0.58
USP39-218ENST00000493829 CMPK1P30085 196 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 CSF2RBP32927 897 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 SERPINB5P36952 375 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 GPR3P46089 330 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 ERVPABLB-1P60509 514 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 SF3A3Q12874 501 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP39-218ENST00000493829 NR1D2Q14995 579 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 CLEC6AQ6EIG7 209 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 RGS9BPQ6ZS82 235 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 CDYL2Q8N8U2 506 aa18.66■□□□□ 0.58
USP39-218ENST00000493829 OR6C4Q8NGE1 309 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms