RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	FAM214A	Q32MH5	1076 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	DPCR1	Q3MIW9	517 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	FBXL19-AS1	Q494R0	122 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	CCDC38	Q502W7	563 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C1orf185	Q5T7R7	199 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	RIPPLY2	Q5TAB7	128 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	MARC1	Q5VT66	337 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	H3F3C	Q6NXT2	135 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C20orf204	Q6ZNR8	217 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SULF2	Q8IWU5	870 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	HOMEZ	Q8IX15	550 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	NPW	Q8N729	165 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	RASGEF1A	Q8N9B8	481 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TTC29	Q8NA56	475 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C16orf52	Q8NHV5	167 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC30A5	Q8TAD4	765 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	BRSK1	Q8TDC3	778 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	CENPI	Q92674	756 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	ZNF653	Q96CK0	615 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	EID2B	Q96D98	161 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TRIM11	Q96F44	468 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	RMDN2	Q96LZ7	410 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	DACH2	Q96NX9	599 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	OR2A14	Q96R47	310 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SMC6	Q96SB8	1091 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	PCDHB18P	Q96TA0	734 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C11orf70	Q9BRQ4	267 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TDRD1	Q9BXT4	1180 aa	Known RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	VPS16	Q9H269	839 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TFB2M	Q9H5Q4	396 aa	Known RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	NT5M	Q9NPB1	228 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	NLRC4	Q9NPP4	1024 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SPTLC3	Q9NUV7	552 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	PARVA	Q9NVD7	372 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TAB2	Q9NYJ8	693 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	C6orf203	Q9P0P8	240 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	TMPRSS11E	Q9UL52	423 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	ACSL5	Q9ULC5	683 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	FZD10	Q9ULW2	581 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	SHOC2	Q9UQ13	582 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	VPS9D1	Q9Y2B5	631 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	HEBP2	Q9Y5Z4	205 aa		5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.06	□□□□□ -1.6
SEC13-219	ENST00000492602	IGLV3-12	A0A075B6K2	115 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC16A5	O15375	505 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PEX1	O43933	1283 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	GPRIN2	O60269	458 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	WDR1	O75083	606 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	GFPT2	O94808	682 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	MATN4	O95460	622 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	MBD3	O95983	291 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TPM3	P06753	285 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FER	P16591	822 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TPH1	P17752	444 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ERCC2	P18074	760 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FBL	P22087	321 aa	Known RBP	5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	AMPD1	P23109	780 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	CYB561	P49447	251 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	DCDC1	P59894	354 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	OGDH	Q02218	1023 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TAP2	Q03519	686 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PRKG2	Q13237	762 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	QPCT	Q16769	361 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	CA9	Q16790	459 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ATP13A5	Q4VNC0	1218 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ODF2	Q5BJF6	829 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FIGN	Q5HY92	759 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PRR31	Q5SQ13	230 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FNBP1L	Q5T0N5	605 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PLAG1	Q6DJT9	500 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FBXO42	Q6P3S6	717 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	DNAJC24	Q6P3W2	148 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	FIGLA	Q6QHK4	219 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	SARM1	Q6SZW1	724 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	CFAP206	Q8IYR0	622 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC5A8	Q8N695	610 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ARIH2OS	Q8N7S6	290 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PHC3	Q8NDX5	983 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	SLC22A8	Q8TCC7	542 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TMEM171	Q8WVE6	324 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	VPS35	Q96QK1	796 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ZFYVE21	Q9BQ24	234 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	THAP2	Q9H0W7	228 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	GAN	Q9H2C0	597 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	CDCP1	Q9H5V8	836 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	L2HGDH	Q9H9P8	463 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	PCDH9	Q9HC56	1237 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	MRPL47	Q9HD33	250 aa	Known RBP	5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	RAD18	Q9NS91	495 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TMEM160	Q9NX00	188 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	SPHK1	Q9NYA1	384 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TRPC4	Q9UBN4	977 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	ACAD8	Q9UKU7	415 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	KLHL20	Q9Y2M5	609 aa		5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	KLF13	Q9Y2Y9	288 aa	Predicted RBP	5.05	□□□□□ -1.6
SEC13-219	ENST00000492602	TTLL3	Q9Y4R7	772 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms