RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 DCAF10Q5QP82 559 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 LYPLAL1Q5VWZ2 237 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 FAM91A1Q658Y4 838 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 TMEM220Q6QAJ8 160 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 C3orf62Q6ZUJ4 267 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 NT5DC3Q86UY8 548 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 MAP7D3Q8IWC1 876 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 GALNT16Q8N428 558 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 DDHD1Q8NEL9 900 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 SPATA22Q8NHS9 363 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 GDAP1Q8TB36 358 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PITPNM3Q9BZ71 974 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 ILKAPQ9H0C8 392 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-213ENST00000492506 WWP1Q9H0M0 922 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 SLC25A51Q9H1U9 297 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 KIR3DX1Q9H7L2 352 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 C1GALT1Q9NS00 363 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 MED13LQ71F56 2210 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 A0A0J9YVX5 310 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TLDC2A0PJX2 215 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 OR2AG2A6NM03 316 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TMEM150CB9EJG8 249 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 MASP2O00187 686 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 GAPDHSO14556 408 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TTI1O43156 1089 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 LRRTM2O43300 516 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 RIPK2O43353 540 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A9O60656 530 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 ST6GAL1P15907 406 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 PORP16435 677 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A6P19224 532 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 POLR2CP19387 275 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A1P22309 533 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A4P22310 534 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 OTX2P32243 289 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 HADHAP40939 763 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 ADARP55265 1226 aaKnown RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TAS2R40P59535 323 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 RCN1Q15293 331 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 LLGL1Q15334 1064 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 SLC14A2Q15849 920 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 DAAM2Q86T65 1068 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 EXOC3L1Q86VI1 746 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TMEM151BQ8IW70 566 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 PLD5Q8N7P1 536 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 HES6Q96HZ4 224 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 VPS50Q96JG6 964 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 C12orf66Q96MD2 445 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 TTC25Q96NG3 672 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 SRPK1Q96SB4 655 aaKnown RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 DPH2Q9BQC3 489 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 DENND2DQ9H6A0 471 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A7Q9HAW7 530 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A10Q9HAW8 530 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 UGT1A8Q9HAW9 530 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 FANCEQ9HB96 536 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 SYTL2Q9HCH5 934 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 CSAG2Q9Y5P2 127 aa12.68□□□□□ -0.38
HDAC3-213ENST00000492506 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 MIF4GDA9UHW6 222 aaKnown RBP12.67□□□□□ -0.38
HDAC3-213ENST00000492506 H3BMH7 237 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 ZNF749O43361 778 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 FKBP6O75344 327 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 ALPPP05187 535 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 CYP2A7P20853 494 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 CDH3P22223 829 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 CRABP2P29373 138 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 GJC1P36383 396 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 PREPP48147 710 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 GLRBP48167 497 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 ASPHQ12797 758 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 SLC29A2Q14542 456 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 SSPNQ14714 243 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 NOMO1Q15155 1222 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 TRADDQ15628 312 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 INAQ16352 499 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 TRMT5Q32P41 509 aaKnown RBP12.67□□□□□ -0.38
HDAC3-213ENST00000492506 LDLRAP1Q5SW96 308 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 GPRC6AQ5T6X5 926 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 ARMC6Q6NXE6 501 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 AAGABQ6PD74 315 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 OR4E2Q8NGC2 313 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 TRPC4APQ8TEL6 797 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 RNF25Q96BH1 459 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-213ENST00000492506 SLC7A6OSQ96CW6 309 aaPredicted RBP12.67□□□□□ -0.38
HDAC3-213ENST00000492506 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 FER1L6-AS2Q96M78 137 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 IP6K3Q96PC2 410 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
HDAC3-213ENST00000492506 NRTNQ99748 197 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms