RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CSE1LP55060 971 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PRKAA1Q13131 559 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 SEMA3AQ14563 771 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 LSM12Q3MHD2 195 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 LIPMQ5VYY2 423 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CES3Q6UWW8 571 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 FAM83HQ6ZRV2 1179 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 TMPRSS9Q7Z410 1059 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM135Q86UB9 458 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 SERPINA9Q86WD7 417 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF761Q86XN6 746 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 SFRP1Q8N474 314 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 METTL25Q8N6Q8 603 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 DCBLD1Q8N8Z6 715 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ZFP28Q8NHY6 868 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 SLC37A2Q8TED4 501 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 NAT6Q93015 286 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 RCN3Q96D15 328 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 TIMM29Q9BSF4 260 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GATA5Q9BWX5 397 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ABCG4Q9H172 646 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 OSGEPL1Q9H4B0 414 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 WDR55Q9H6Y2 383 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 WDR41Q9HAD4 459 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PACSIN3Q9UKS6 424 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CNOT11Q9UKZ1 510 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CLCA2Q9UQC9 943 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CDYLQ9Y232 598 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 WDR37Q9Y2I8 494 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PCDHB1Q9Y5F3 818 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GMEB1Q9Y692 573 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 KIF26BQ2KJY2 2108 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 IGLV3-16A0A075B6K0 115 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PRAMEF33A0A0G2JMD5 474 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PRSS51A0A1B0GVH4 220 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CFLARO15519 480 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 NUDT21O43809 227 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 BCAS2O75934 225 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GOT2P00505 430 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 CAPNS1P04632 268 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ENO3P13929 434 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ITGALP20701 1170 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ACRV1P26436 265 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 RPL10P27635 214 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 EPHA3P29320 983 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GMPRP36959 345 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 NPY2RP49146 381 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 OR1D5P58170 312 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 MYBPC1Q00872 1141 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 APOFQ13790 326 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GTF2H3Q13889 308 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 GPR33Q49SQ1 333 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PCID2Q5JVF3 399 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 TAS2R42Q7RTR8 314 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF438Q7Z4V0 828 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 SPRED1Q7Z699 444 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ITFG2Q969R8 447 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 FCRL3Q96P31 734 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 HAUS8Q9BT25 410 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 MRPL1Q9BYD6 325 aaKnown RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ZBTB26Q9HCK0 441 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ZDHHC3Q9NYG2 299 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 RIMKLBQ9ULI2 386 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 ATXN7L1Q9ULK2 861 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-219ENST00000491747 PRSS21Q9Y6M0 314 aa9.14□□□□□ -0.95
BRCA1-219ENST00000491747 UNC13CQ8NB66 2214 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 MAGEB16A2A368 324 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 RPLP0P05388 317 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CHRNGP07510 517 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 F3P13726 295 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PNLIPP16233 465 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 TFEBP19484 476 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 MPSTP25325 297 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PBLDP30039 288 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 HPCAP84074 193 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CACNG1Q06432 222 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CEACAM7Q14002 265 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NFE2L1Q14494 772 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NR1D2Q14995 579 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CLCA4Q14CN2 919 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ZYG11AQ6WRX3 759 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 LILRA3Q8N6C8 439 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CLDN19Q8N6F1 224 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 PPHLN1Q8NEY8 458 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 OR6C4Q8NGE1 309 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 GFM2Q969S9 779 aaKnown RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ULK4Q96C45 1275 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 CATSPER2Q96P56 530 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 COPS8Q99627 209 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 NUF2Q9BZD4 464 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 IL22Q9GZX6 179 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 LRRN3Q9H3W5 708 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 SYNDIG1Q9H7V2 258 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 TREX1Q9NSU2 369 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 MRGBPQ9NV56 204 aa9.13□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF624Q9P2J8 865 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-219ENST00000491747 TLK1Q9UKI8 766 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms