RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OARD1Q9Y530 152 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PCDHB3Q9Y5E6 796 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 IKBKGQ9Y6K9 419 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 USP24Q9UPU5 2620 aa15.64■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 URB1O60287 2271 aaKnown RBP15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 OR2A25A4D2G3 310 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RIPK2O43353 540 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SNRNP200O75643 2136 aaKnown RBP15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 OR2B3O76000 313 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NTRK1P04629 796 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLC35E2BP0CK96 405 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CCND1P24385 295 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 STAT5AP42229 794 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ATP6V0D1P61421 351 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CDKL1Q00532 357 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NAE1Q13564 534 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CSHL1Q14406 222 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PRAMEF17Q5VTA0 474 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CCDC81Q6ZN84 652 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TAOK1Q7L7X3 1001 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CCDC91Q7Z6B0 441 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MCATQ8IVS2 390 aaKnown RBP15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SPATA6LQ8N4H0 392 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 UBXN10Q96LJ8 280 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PLCD4Q9BRC7 762 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 UNKQ9C0B0 810 aaKnown RBP15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLC7A5P2Q9GIP4 190 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PCBD2Q9H0N5 130 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ANKZF1Q9H8Y5 726 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 IRAK4Q9NWZ3 460 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EURLQ9NYK6 297 aa15.63■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DMXL2Q8TDJ6 3036 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 IGKV1-8A0A0C4DH67 115 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LOC101059948A0A1B0GTJ6 334 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EXOC1LA0A1B0GW35 172 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HMX2A2RU54 273 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 POC1B-GALNT4F8VUJ3 575 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 H3BMH7 237 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZSCAN9O15535 394 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 NRP2O60462 931 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CTSVO60911 334 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ANXA5P08758 320 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CCNYL3P0C7X3 344 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CD1DP15813 335 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 MSH2P43246 934 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SERPINB8P50452 374 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SERPINB9P50453 376 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CXADRP78310 365 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZNF425Q6IV72 752 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CAPN13Q6MZZ7 669 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TLDC1Q6P9B6 456 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 RNF44Q7L0R7 432 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TBC1D1Q86TI0 1168 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 OR56A3Q8NH54 315 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 KIAA1143Q96AT1 154 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ALKBH8Q96BT7 664 aaKnown RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CLIP3Q96DZ5 547 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CRELD1Q96HD1 420 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LRFN5Q96NI6 719 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EGFL8Q99944 293 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZFYVE21Q9BQ24 234 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SELENOSQ9BQE4 189 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SGPP1Q9BX95 441 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SPRTNQ9H040 489 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ACTR5Q9H9F9 607 aaPredicted RBP15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CPNE5Q9HCH3 593 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SNX15Q9NRS6 342 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZNF180Q9UJW8 692 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 AP1M2Q9Y6Q5 423 aa15.62■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 A0A087X1B8 175 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ZNF749O43361 778 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CTSBP07858 339 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 HBQ1P09105 142 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LTA4HP09960 611 aaKnown RBP15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LIFP15018 202 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CNTFP26441 200 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GMPRP36959 345 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLC26A3P40879 764 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 VAC14Q08AM6 782 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GPS2Q13227 327 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TAF1BQ53T94 588 aaPredicted RBP15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LCTLQ6UWM7 567 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 ADCK2Q7Z695 626 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PAQR7Q86WK9 346 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 C17orf64Q86WR6 236 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SLC38A9Q8NBW4 561 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DCAKDQ8WVC6 231 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 KIAA1191Q96A73 305 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PYCR2Q96C36 320 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EFHD1Q9BUP0 239 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 GPN2Q9H9Y4 310 aaPredicted RBP15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 LHX9Q9NQ69 397 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 CUEDC1Q9NWM3 386 aaPredicted RBP15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 TLK1Q9UKI8 766 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 PADI1Q9ULC6 663 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 SNX7Q9UNH6 387 aa15.61■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 A0A0J9YVX5 310 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 K7ENP7 123 aa15.6■□□□□ 0.09
MSH5-SAPCD1-206ENST00000491552 EFSO43281 561 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms