RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 EPOP01588 193 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CA8P35219 290 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 DDOSTP39656 456 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 UGT2B15P54855 530 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 NPRL3Q12980 569 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 MAD2L1Q13257 205 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 PCBP2Q15366 365 aaKnown RBP eCLIP18.82■□□□□ 0.68e-6■■■■□ 24
SNAPC3-206ENST00000490969 LRRC26Q2I0M4 334 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 SCD5Q86SK9 330 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 HORMAD1Q86X24 394 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 TMEM248Q9NWD8 314 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 MAU2Q9Y6X3 613 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 A0A0U1RQS6 177 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CAPN5O15484 640 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 ERN1O75460 977 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 OTCP00480 354 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 ITGB1P05556 798 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 GNG2P59768 71 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 GPR50Q13585 617 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 STARD3Q14849 445 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 FAM26DQ5JW98 314 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 SNAP47Q5SQN1 464 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CACHD1Q5VU97 1274 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 FAM171A1Q5VUB5 890 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 ARMCX6Q7L4S7 300 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 MILR1Q7Z6M3 343 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CCDC190Q86UF4 302 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 ZNF683Q8IZ20 524 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 BEND7Q8N7W2 519 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 SLAIN1Q8ND83 568 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 PSD4Q8NDX1 1056 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 OR4K2Q8NGD2 314 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CENPOQ9BU64 300 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 IPPKQ9H8X2 491 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 PSORS1C1Q9UIG5 152 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 BTBD3Q9Y2F9 522 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 CARD8Q9Y2G2 431 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 GRIP1Q9Y3R0 1128 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 SAMHD1Q9Y3Z3 626 aaKnown RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 MICAL3Q7RTP6 2002 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 MOXD2PA6NHM9 499 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 H3BQ06 376 aaPredicted RBP18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 OR1I1O60431 355 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SEMA3DO95025 777 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CCNDBP1O95273 360 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 PBX3P40426 434 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 PIK3CGP48736 1102 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 HMGCS1Q01581 520 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 GPNMBQ14956 572 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CTSL3PQ5NE16 218 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 FAM171BQ6P995 826 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 NRARPQ7Z6K4 114 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SLC43A3Q8NBI5 491 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CLHC1Q8NHS4 586 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TAS2R9Q9NYW1 312 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TBC1D24Q9ULP9 559 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TNPO3Q9Y5L0 923 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TLL1O43897 1013 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SLC19A1P41440 591 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 ABHD18Q0P651 414 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SUSD1Q6UWL2 747 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CD300LGQ6UXG3 332 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TCAIMQ8N3R3 496 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 RASSF5Q8WWW0 418 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 MYDGFQ969H8 173 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CHCHD6Q9BRQ6 235 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 CCDC32Q9BV29 185 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 NMUR1Q9HB89 426 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SARS2Q9NP81 518 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 ERVK13-1Q9NX77 482 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 SIRT5Q9NXA8 310 aa18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 TDRD15B5MCY1 1934 aaKnown RBP18.81■□□□□ 0.6
SNAPC3-206ENST00000490969 FFAR3O14843 346 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 WNT9AO14904 365 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 GPR42O15529 346 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 ZNF623O75123 536 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 FABP3P05413 133 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 BRCC3P46736 316 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 GALK2Q01415 458 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 IL10RBQ08334 325 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 CAMK2GQ13555 558 aaPredicted RBP18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 TIGD5Q53EQ6 642 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 LRIF1Q5T3J3 769 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 TMEM132CQ8N3T6 1108 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 ZNF675Q8TD23 568 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 SERPINB11Q96P15 392 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 KCNH6Q9H252 994 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 TNKS2Q9H2K2 1166 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 SERHLQ9NQF3 203 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 PLSCR3Q9NRY6 295 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 PCDHGA6Q9Y5G7 932 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 GNPDA1P46926 289 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 LIMK1P53667 647 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 VLDLRP98155 873 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 UPP1Q16831 310 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 PARP15Q460N3 678 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 ZNF517Q6ZMY9 492 aaPredicted RBP18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 PIANPQ8IYJ0 282 aa18.8■□□□□ 0.6
SNAPC3-206ENST00000490969 CLIP3Q96DZ5 547 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms