RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MGAQ8IWI9 3026 aa7.37□□□□□ -1.23
CLDN1-202ENST00000490800 TRBV23OR9-2A0A075B6M9 112 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 RHPN2P1A8MT19 583 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 E5RI56 91 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 NUDT21O43809 227 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ZBTB14O43829 449 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 MTX2O75431 263 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 AP2A2O94973 939 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SLC25A14O95258 325 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TSPAN12O95859 305 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 VIMP08670 466 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 JMJD7P0C870 316 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 FGF3P11487 239 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ATP1B2P14415 290 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CPA3P15088 417 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TFEBP19484 476 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ITIH1P19827 911 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CHRM3P20309 590 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TEAD1P28347 426 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ALDH4A1P30038 563 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 AKT1P31749 480 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CCKBRP32239 447 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SKIV2L2P42285 1042 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 KPNA2P52292 529 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 MAZP56270 477 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 RHDQ02161 417 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CFHR1Q03591 330 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ILF3Q12906 894 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ACAP2Q15057 778 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TGIF1Q15583 401 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CHI3L2Q15782 390 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 KIAA1614Q5VZ46 1190 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 UGT3A1Q6NUS8 523 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 KLC3Q6P597 504 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 DOK6Q6PKX4 331 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SLC30A9Q6PML9 568 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TREML4Q6UXN2 200 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 DET1Q7L5Y6 550 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 ISCA2Q86U28 154 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 C17orf82Q86X59 251 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 C10orf107Q8IVU9 208 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SULF2Q8IWU5 870 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 TRIM42Q8IWZ5 723 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CPNE9Q8IYJ1 553 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 NAGSQ8N159 534 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 NKAPQ8N5F7 415 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 RDH11Q8TC12 318 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 LRRC8CQ8TDW0 803 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 PATE1Q8WXA2 126 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 PTERQ96BW5 349 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 DCUN1D1Q96GG9 259 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CCT8L2Q96SF2 557 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 DERL2Q9GZP9 239 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 MRPL46Q9H2W6 279 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SEMA6CQ9H3T2 930 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 MANSC1Q9H8J5 431 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 RDH14Q9HBH5 336 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SYTL2Q9HCH5 934 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SARS2Q9NP81 518 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 CPSF2Q9P2I0 782 aaKnown RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 KLHL42Q9P2K6 505 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 XPR1Q9UBH6 696 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 PISDQ9UG56 409 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 MID2Q9UJV3 735 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 IKZF3Q9UKT9 509 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 SLC17A4Q9Y2C5 497 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 LOXL2Q9Y4K0 774 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 PCDHGA7Q9Y5G6 932 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 PTPRQQ9UMZ3 2332 aa7.36□□□□□ -1.23
CLDN1-202ENST00000490800 COL27A1Q8IZC6 1860 aaPredicted RBP7.36□□□□□ -1.23
CLDN1-202ENST00000490800 K7ENP7 123 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CDC7O00311 574 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 KLF11O14901 512 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 PPM1DO15297 605 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 INPP4BO15327 924 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 NVLO15381 856 aaKnown RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 DLX3O60479 287 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CPNE6O95741 557 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 FAM107AO95990 144 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 RBP1P09455 135 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 OR56A5P0C7T3 313 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 MYL2P10916 166 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 RALBP11234 206 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 NEFHP12036 1026 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 MSH3P20585 1137 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 AOAHP28039 575 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CD1CP29017 333 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ETV5P41161 510 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ACTR1BP42025 376 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 KCNC1P48547 511 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 CTSCP53634 463 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 MAPK10P53779 464 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 IL2P60568 153 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ACTR1AP61163 376 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 ATP6V0D1P61421 351 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 GSTM4Q03013 218 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 BST1Q10588 318 aa7.35□□□□□ -1.23
CLDN1-202ENST00000490800 TMEM115Q12893 351 aaPredicted RBP7.35□□□□□ -1.23
CLDN1-202ENST00000490800 BIRC2Q13490 618 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms