RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SHMT2P34897 504 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 CD97P48960 835 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 PGGT1BP53609 377 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 EIF3BP55884 814 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 RPS15P62841 145 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 GSTM4Q03013 218 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TPSAB1Q15661 275 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SYTL3Q4VX76 610 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 LACTB2Q53H82 288 aaPredicted RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 DNAJC21Q5F1R6 531 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 IZUMO3Q5VZ72 239 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 PTRHD1Q6GMV3 140 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 ZNF549Q6P9A3 640 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 FIGLAQ6QHK4 219 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 Q6ZS46 218 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 NLRP9Q7RTR0 991 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 DENND6AQ8IWF6 608 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SYTL1Q8IYJ3 562 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SHISA5Q8N114 240 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TRIM58Q8NG06 486 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 OR8K5Q8NH50 307 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 DENND1AQ8TEH3 1009 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 LPGAT1Q92604 370 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 LRFN5Q96NI6 719 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MESP1Q9BRJ9 268 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 GPR87Q9BY21 358 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 IL22Q9GZX6 179 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 VPS37BQ9H9H4 285 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 POLG2Q9UHN1 485 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TUBD1Q9UJT1 453 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 ANAPC5Q9UJX4 755 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 TCFL5Q9UL49 500 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 SOX13Q9UN79 622 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MED16Q9Y2X0 877 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 ANKRD17O75179 2603 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 ITPR2Q14571 2701 aa7.03□□□□□ -1.28
PRPF4B-208ENST00000490653 MDC1Q14676 2089 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 LOC105369274A0A096LPK9 316 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 LOC102723532A0A0G2JNH3 316 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ZCWPW2A0A1B0GU75 182 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 USP27XA6NNY8 438 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MATN2O00339 956 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 QSOX1O00391 747 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 PAX4O43316 350 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CTSVO60911 334 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 KLF7O75840 302 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OR2B3O76000 313 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 RECKO95980 971 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 RAB40ALP0C0E4 278 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CD9P21926 228 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 RPS3P23396 243 aaKnown RBP eCLIP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OTX2P32243 289 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CASRP41180 1078 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MAGEA6P43360 314 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 UQCRFS1P47985 274 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 PMS2P54278 862 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 TIAL1Q01085 375 aaKnown RBP eCLIP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CTBP1Q13363 440 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 RAPSNQ13702 412 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 SLC5A12Q1EHB4 618 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 NADK2Q4G0N4 442 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ANKRD20A4Q4UJ75 823 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 TCTN3Q6NUS6 607 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 FBXO42Q6P3S6 717 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CNSTQ6PJW8 725 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CYHR1Q6ZMK1 362 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ASB18Q6ZVZ8 466 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 SYVN1Q86TM6 617 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 HOOK3Q86VS8 718 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MCATQ8IVS2 390 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 APLFQ8IW19 511 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OR4N4Q8N0Y3 316 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 CARFQ8N187 725 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 METTL27Q8N6F8 245 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OTUD6BQ8N6M0 293 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 FDCSPQ8NFU4 85 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OR2L8Q8NGY9 312 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MAIP1Q8WWC4 291 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ASZ1Q8WWH4 475 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MIB2Q96AX9 1013 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 TCTN2Q96GX1 697 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 PBKQ96KB5 322 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 SIGLEC10Q96LC7 697 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 PWWP2AQ96N64 755 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 GBP5Q96PP8 586 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 TTC1Q99614 292 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MIPEPQ99797 713 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 NUDT9Q9BW91 350 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 NLNQ9BYT8 704 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 SLC7A5P2Q9GIP4 190 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 ING2Q9H160 280 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 MRM3Q9HC36 420 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 FBXO6Q9NRD1 293 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 EURLQ9NYK6 297 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 OR6C2Q9NZP2 312 aa7.02□□□□□ -1.29
PRPF4B-208ENST00000490653 LUZP4Q9P127 313 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms