RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 IQCHQ86VS3 1027 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 THNSL1Q8IYQ7 743 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 EMC1Q8N766 993 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 DBF4BQ8NFT6 615 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 CFAP61Q8NHU2 1237 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 ZFAND2BQ8WV99 257 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 CLDN23Q96B33 292 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 CSF3RQ99062 836 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 ADPGKQ9BRR6 497 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 NAA11Q9BSU3 229 aaPredicted RBP4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 PPIL3Q9H2H8 161 aaKnown RBP4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 ST6GALNAC4Q9H4F1 302 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 DENND2DQ9H6A0 471 aaPredicted RBP4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 ZWILCHQ9H900 591 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 SELENONQ9NZV5 590 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 CRNNQ9UBG3 495 aaPredicted RBP4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 TSPYL4Q9UJ04 414 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 KLHL20Q9Y2M5 609 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 SQORQ9Y6N5 450 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 BSNQ9UPA5 3926 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 TLN2Q9Y4G6 2542 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 FOCADQ5VW36 1801 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 IL16Q14005 1332 aa4.72□□□□□ -1.65
SSX2IP-208ENST00000490476 PDCD11Q14690 1871 aaKnown RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 CSMD2Q7Z408 3487 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 A0A0B4J293 547 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 H3BNX3 289 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 TMEM189-UBE2V1I3L0A0 370 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 SPRY1O43609 319 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 SLC25A27O95847 323 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 QDPRP09417 244 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 CCDC175P0C221 793 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 TMEM191BP0C7N4 346 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 HOXB2P14652 356 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 HRH2P25021 359 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 LMO1P25800 156 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 HNRNPH2P55795 449 aaKnown RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 MLF2Q15773 248 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 PTGISQ16647 500 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 SHROOM1Q2M3G4 852 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 AMZ1Q400G9 498 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 ALS2CLQ60I27 953 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 CCDC186Q7Z3E2 898 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 GPR180Q86V85 440 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 FAM133AQ8N9E0 248 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 TSPAN14Q8NG11 270 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 OR14A16Q8NHC5 309 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 UTP15Q8TED0 518 aaKnown RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 ADAMTS14Q8WXS8 1223 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 WASF1Q92558 559 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 NXNL1Q96CM4 212 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 LINC00615Q96LM1 132 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 FER1L6-AS2Q96M78 137 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 ZNF830Q96NB3 372 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 MMTAG2Q9BU76 263 aaKnown RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 EDEM3Q9BZQ6 932 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 EBF3Q9H4W6 596 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 RPAP3Q9H6T3 665 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 MAGIXQ9H6Y5 334 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 CWC25Q9NXE8 425 aaPredicted RBP4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 ELOVL5Q9NYP7 299 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 FBXL2Q9UKC9 423 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 LOXL2Q9Y4K0 774 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 ACANP16112 2415 aa4.71□□□□□ -1.66
SSX2IP-208ENST00000490476 TGP01266 2768 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 EDDM13A0A1B0GTR0 161 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 FAM170AA1A519 330 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 OR6C75A6NL08 312 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 J3QR06 171 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CDX4O14627 284 aaPredicted RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 PPFIA2O75334 1257 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ZNF217O75362 1048 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SERPINI2O75830 405 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SOX30O94993 753 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 C22orf31O95567 290 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SCG2P13521 617 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 FDPSP14324 419 aaKnown RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ERCC2P18074 760 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SSTR2P30874 369 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 GABRA5P31644 462 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 COPB2P35606 906 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 APOBEC1P41238 236 aaKnown RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 AMTP48728 403 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SIRPAP78324 504 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 SSBP2P81877 361 aaPredicted RBP4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CBWD6Q4V339 395 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CBWD3Q5JTY5 395 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 PLPP4Q5VZY2 271 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ZDHHC20Q5W0Z9 365 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 FRG2Q64ET8 278 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 C18orf63Q68DL7 685 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ARMCX2Q7L311 632 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 ADIPOR2Q86V24 386 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 LONP2Q86WA8 852 aa4.7□□□□□ -1.66
SSX2IP-208ENST00000490476 CEP57Q86XR8 500 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms