RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 UBE2R2Q712K3 238 aaPredicted RBP16.72■□□□□ 0.27
SEC13-218ENST00000490283 MYO1HQ8N1T3 1032 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 OR2Y1Q8NGV0 311 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 FKBP10Q96AY3 582 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 NDNQ99608 321 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 ZFYVE21Q9BQ24 234 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TRIM51Q9BSJ1 452 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TRIM55Q9BYV6 548 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TRIM31Q9BZY9 425 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TAC3Q9UHF0 121 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 CHMP2BQ9UQN3 213 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 MED16Q9Y2X0 877 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 PCDHGA9Q9Y5G4 932 aaKnown RBP16.72■□□□□ 0.27
SEC13-218ENST00000490283 OR2A25A4D2G3 310 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 EFCAB8A8MWE9 144 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 PYCARD-AS1I3L0S3 204 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 CTSVO60911 334 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 SLC16A8O95907 504 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 EIF2S1P05198 315 aaKnown RBP16.71■□□□□ 0.27
SEC13-218ENST00000490283 SPTBP11277 2137 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 NR1D1P20393 614 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 IVDP26440 423 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ELK3P41970 407 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 CSRP3P50461 194 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ITGA8P53708 1063 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ABATP80404 500 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ATP1A4Q13733 1029 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 WASHC2DQ5SRD0 308 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ICE2Q659A1 982 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 RNF44Q7L0R7 432 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 PIWIL4Q7Z3Z4 852 aaKnown RBP16.71■□□□□ 0.27
SEC13-218ENST00000490283 ADCK2Q7Z695 626 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 CNTN4Q8IWV2 1026 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 BBOF1Q8ND07 529 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 MCOLN3Q8TDD5 553 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 PTERQ96BW5 349 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 FER1L6-AS2Q96M78 137 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 KRT12Q99456 494 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 CLMPQ9H6B4 373 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 ABCF3Q9NUQ8 709 aa16.71■□□□□ 0.27
SEC13-218ENST00000490283 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
SEC13-218ENST00000490283 GCN1Q92616 2671 aaKnown RBP16.71■□□□□ 0.26
SEC13-218ENST00000490283 HELZ2Q9BYK8 2649 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 FITM1A5D6W6 292 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 GFYI3L273 518 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 KLF7O75840 302 aaPredicted RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 SEC31AO94979 1220 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 ALBP02768 609 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 C8GP07360 202 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 PRDX1Q06830 199 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 SP140Q13342 867 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 PDAP1Q13442 181 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 HP1BP3Q5SSJ5 553 aaPredicted RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 MRPL14Q6P1L8 145 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 GALNT7Q86SF2 657 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 MRGPREQ86SM8 312 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 CLEC1AQ8NC01 280 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 PPFIBP2Q8ND30 876 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 ZNF480Q8WV37 535 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 RERGQ96A58 199 aaPredicted RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 ZNF285Q96NJ3 590 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 PLCD4Q9BRC7 762 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 EPN3Q9H201 632 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 SLC6A20Q9NP91 592 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 NXT1Q9UKK6 140 aaKnown RBP16.7■□□□□ 0.26
SEC13-218ENST00000490283 ZNF451Q9Y4E5 1061 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 PCDHGB7Q9Y5F8 929 aa16.7■□□□□ 0.26
SEC13-218ENST00000490283 HYKKA2RU49 373 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 E7ENX8 843 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 KLHL41O60662 606 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 AHSGP02765 367 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 HIST1H2AGP0C0S8 130 aaPredicted RBP16.69■□□□□ 0.26
SEC13-218ENST00000490283 HIST1H2ADP20671 130 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 ITGAXP20702 1163 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 GCGRP47871 477 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 TAP2Q03519 686 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 CALCOCO2Q13137 446 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 MUM1Q2TAK8 710 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 FRMPD2BQ6IN97 320 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 PRMT9Q6P2P2 845 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 CYHR1Q6ZMK1 362 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 OVCH1Q7RTY7 1134 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 IGDCC3Q8IVU1 814 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 VPS50Q96JG6 964 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 CABS1Q96KC9 395 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 HIST1H2AHQ96KK5 128 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 CCDC138Q96M89 665 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 HIST1H2AJQ99878 128 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 H2AFJQ9BTM1 129 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 WDR54Q9H977 334 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 CCDC177Q9NQR7 707 aaPredicted RBP16.69■□□□□ 0.26
SEC13-218ENST00000490283 ENAMQ9NRM1 1142 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 GPR83Q9NYM4 423 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 ZFATQ9P243 1243 aa16.69■□□□□ 0.26
SEC13-218ENST00000490283 A6NL46 340 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 SLC16A5O15375 505 aa16.68■□□□□ 0.26
SEC13-218ENST00000490283 PRPF4O43172 522 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEC13-218ENST00000490283 EZRP15311 586 aaKnown RBP16.68■□□□□ 0.26
SEC13-218ENST00000490283 CASQ1P31415 396 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms