RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 OR2A1Q8NGT9 310 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 GSDMBQ8TAX9 411 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 HMGCLL1Q8TB92 370 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 SKA2Q8WVK7 121 aaPredicted RBP15.14■□□□□ 0.01
PLOD3-216ENST00000489927 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
PLOD3-216ENST00000489927 P2RY12Q9H244 342 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 CHRAC1Q9NRG0 131 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 RAB6BQ9NRW1 208 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 C3orf18Q9UK00 162 aa15.14■□□□□ 0.01
PLOD3-216ENST00000489927 A0A0U1RQJ8 604 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 A0A1B0GUH1 482 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 A0A1W2PPV9 198 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
PLOD3-216ENST00000489927 LIASO43766 372 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 COX6A1P12074 109 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 ETS1P14921 441 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 ARG2P78540 354 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 SP5Q6BEB4 398 aaPredicted RBP15.13■□□□□ 0.01
PLOD3-216ENST00000489927 CNSTQ6PJW8 725 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 OTOAQ7RTW8 1153 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 LAPTM4BQ86VI4 370 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 RAB42Q8N4Z0 105 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 PPHLN1Q8NEY8 458 aaKnown RBP15.13■□□□□ 0.01
PLOD3-216ENST00000489927 PSMF1Q92530 271 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 MRFAP1L1Q96HT8 127 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 HES6Q96HZ4 224 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 MAGEB10Q96LZ2 347 aaPredicted RBP15.13■□□□□ 0.01
PLOD3-216ENST00000489927 C10orf90Q96M02 699 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 PANX3Q96QZ0 392 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 TAAR6Q96RI8 345 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 PLA2G3Q9NZ20 509 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 PTGFRNQ9P2B2 879 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 GNPTGQ9UJJ9 305 aa15.13■□□□□ 0.01
PLOD3-216ENST00000489927 CSMD2Q7Z408 3487 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 OTOGQ6ZRI0 2925 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 IGLV3-12A0A075B6K2 115 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 NSG1A0A0A6YYJ2 146 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 PRSS44E7EML9 344 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 USP1O94782 785 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 APRTP07741 180 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 PRR35P0CG20 571 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 FBLP22087 321 aaKnown RBP15.12■□□□□ 0.01
PLOD3-216ENST00000489927 SOX11P35716 441 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 TNFSF10P50591 281 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 TDGF1P3P51864 188 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 FASTKQ14296 549 aaKnown RBP15.12■□□□□ 0.01
PLOD3-216ENST00000489927 MUM1Q2TAK8 710 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 ZNF324BQ6AW86 544 aaPredicted RBP15.12■□□□□ 0.01
PLOD3-216ENST00000489927 FBXO42Q6P3S6 717 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 NDUFAF7Q7L592 441 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 BRIX1Q8TDN6 353 aaKnown RBP15.12■□□□□ 0.01
PLOD3-216ENST00000489927 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 ACAT2Q9BWD1 397 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 UNKQ9C0B0 810 aaKnown RBP15.12■□□□□ 0.01
PLOD3-216ENST00000489927 ZNF148Q9UQR1 794 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 MRFAP1Q9Y605 127 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 APCP25054 2843 aa15.12■□□□□ 0.01
PLOD3-216ENST00000489927 DYTNA2CJ06 578 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 OR2A25A4D2G3 310 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 FFAR3O14843 346 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 PCDH17O14917 1159 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 KPNA5O15131 536 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 GPR42O15529 346 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 ERVK-10P10266 1014 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 CCNFP41002 786 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 ZNF75DP51815 510 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 KCNK10P57789 538 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 CRADDP78560 199 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 EEF1A2Q05639 463 aaKnown RBP15.11■□□□□ 0.01
PLOD3-216ENST00000489927 PRTGQ2VWP7 1150 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 PCID2Q5JVF3 399 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 SIRT6Q8N6T7 355 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 C1orf54Q8WWF1 131 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 RELTQ969Z4 430 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 DPH7Q9BTV6 452 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 SYNPO2LQ9H987 977 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 TREX1Q9NSU2 369 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 COPG2Q9UBF2 871 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 TRPC4Q9UBN4 977 aa15.11■□□□□ 0.01
PLOD3-216ENST00000489927 TSR3Q9UJK0 312 aaKnown RBP15.11■□□□□ 0.01
PLOD3-216ENST00000489927 DIDO1Q9BTC0 2240 aaKnown RBP15.11■□□□□ 0.01
PLOD3-216ENST00000489927 TEP1Q99973 2627 aaKnown RBP15.1■□□□□ 0.01
PLOD3-216ENST00000489927 IGHV1-45A0A0A0MS14 117 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 TRAV17A0A0B4J275 112 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 A0A1W2PQ72 361 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 IDSB3KWA1 339 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 H0YGG7 62 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 NDUFS3O75489 264 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 F10P00742 488 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 SERPINA7P05543 415 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 CELA2AP08217 269 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 FDXRP22570 491 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 RPS3P23396 243 aaKnown RBP eCLIP15.1■□□□□ 0.013e-9■■□□□ 12.6
PLOD3-216ENST00000489927 ELAVL4P26378 380 aaKnown RBP15.1■□□□□ 0.01
PLOD3-216ENST00000489927 CMPK1P30085 196 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 EMP2P54851 167 aa15.1■□□□□ 0.01
PLOD3-216ENST00000489927 EIF3BP55884 814 aaKnown RBP15.1■□□□□ 0.01
PLOD3-216ENST00000489927 SESN2P58004 480 aaPredicted RBP15.1■□□□□ 0.01
PLOD3-216ENST00000489927 ARF3P61204 181 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms