RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 STMN1P16949 149 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 CCND1P24385 295 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 RORAP35398 523 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 GPS2Q13227 327 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 PHKG1Q16816 387 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 TCTE1Q5JU00 501 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 THEMIS2Q5TEJ8 643 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 AGTRAPQ6RW13 159 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 ZNF517Q6ZMY9 492 aaPredicted RBP16.65■□□□□ 0.26
MDC1-206ENST00000489540 DSELQ8IZU8 1212 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 ATL1Q8WXF7 558 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 MR1Q95460 341 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 UBL7Q96S82 380 aaPredicted RBP16.65■□□□□ 0.26
MDC1-206ENST00000489540 CYTH2Q99418 400 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 CCDC177Q9NQR7 707 aaPredicted RBP16.65■□□□□ 0.26
MDC1-206ENST00000489540 ENAMQ9NRM1 1142 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 ARL15Q9NXU5 204 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 NINJ2Q9NZG7 142 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 IL17BQ9UHF5 180 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 SRPK3Q9UPE1 567 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 PCDHGA6Q9Y5G7 932 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 ZFHX4Q86UP3 3567 aa16.65■□□□□ 0.26
MDC1-206ENST00000489540 OR2A25A4D2G3 310 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 CTSVO60911 334 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 RECKO95980 971 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 HRH2P25021 359 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 ECHS1P30084 290 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 ARSFP54793 590 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 RPS15P62841 145 aaKnown RBP16.64■□□□□ 0.25
MDC1-206ENST00000489540 RELAQ04206 551 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 DNASE1L3Q13609 305 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 CRTC2Q53ET0 693 aaPredicted RBP16.64■□□□□ 0.25
MDC1-206ENST00000489540 ZNF655Q8N720 491 aaPredicted RBP16.64■□□□□ 0.25
MDC1-206ENST00000489540 CT55Q8WUE5 264 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 SELENOSQ9BQE4 189 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 PLCD4Q9BRC7 762 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 NDC1Q9BTX1 674 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 AKIRIN1Q9H9L7 192 aaPredicted RBP16.64■□□□□ 0.25
MDC1-206ENST00000489540 L2HGDHQ9H9P8 463 aa16.64■□□□□ 0.25
MDC1-206ENST00000489540 DSPP15924 2871 aaKnown RBP16.63■□□□□ 0.25
MDC1-206ENST00000489540 ERVH48-1M5A8F1 160 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 KATNA1O75449 491 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ITGB2P05107 769 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 AGXTP21549 392 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 F8A1P23610 371 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 YBX1P67809 324 aaKnown RBP16.63■□□□□ 0.25
MDC1-206ENST00000489540 NAE1Q13564 534 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ZNF460Q14592 562 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 YOD1Q5VVQ6 348 aaPredicted RBP16.63■□□□□ 0.25
MDC1-206ENST00000489540 RHBDD2Q6NTF9 364 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 FBXO42Q6P3S6 717 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 FAM199XQ6PEV8 388 aaPredicted RBP16.63■□□□□ 0.25
MDC1-206ENST00000489540 PROKR1Q8TCW9 393 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ANKRD49Q8WVL7 239 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 STARD8Q92502 1023 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 FBXL8Q96CD0 374 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ZNF285Q96NJ3 590 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 C17orf62Q9BQA9 187 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 FUT8Q9BYC5 575 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 DERL2Q9GZP9 239 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ATG10Q9H0Y0 220 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 CHST8Q9H2A9 424 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 CAB39LQ9H9S4 337 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 SLC6A20Q9NP91 592 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 ABCF3Q9NUQ8 709 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 CTNNAL1Q9UBT7 734 aa16.63■□□□□ 0.25
MDC1-206ENST00000489540 FARSAQ9Y285 508 aaKnown RBP16.63■□□□□ 0.25
MDC1-206ENST00000489540 IGKV1-8A0A0C4DH67 115 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 NKX2-8O15522 239 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 FAM155BO75949 473 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 CTSBP07858 339 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 RAB40ALP0C0E4 278 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 PTPN4P29074 926 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CRABP2P29373 138 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 RAB10P61026 200 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 TBPL1P62380 186 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 GRM7Q14831 915 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 ZKSCAN8Q15776 578 aaPredicted RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 PRAMEF13Q5VWM6 474 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 ZNF425Q6IV72 752 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CAPN13Q6MZZ7 669 aaPredicted RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 SBSNQ6UWP8 590 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 MBOAT1Q6ZNC8 495 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 RNF44Q7L0R7 432 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 ADAMTSL2Q86TH1 951 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 PAQR7Q86WK9 346 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 LSM14AQ8ND56 463 aaKnown RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 MED8Q96G25 268 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 WBP1Q96G27 269 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CATSPER2Q96P56 530 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 ZFYVE21Q9BQ24 234 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 SGPP1Q9BX95 441 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 CDC42EP4Q9H3Q1 356 aaKnown RBP16.62■□□□□ 0.25
MDC1-206ENST00000489540 ACSS3Q9H6R3 686 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 TXLNGQ9NUQ3 528 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 IKZF3Q9UKT9 509 aa16.62■□□□□ 0.25
MDC1-206ENST00000489540 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms