RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C1GALT1C1LP0DN25 315 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 CD22P20273 847 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 VARSP26640 1264 aaKnown RBP20.16■□□□□ 0.82
SND1-214ENST00000489417 PSMB5P28074 263 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 HOXD12P35452 270 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 DPP6P42658 865 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 GPR18Q14330 331 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 PLCL1Q15111 1095 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 ZRSR2Q15696 482 aaKnown RBP20.16■□□□□ 0.82
SND1-214ENST00000489417 XKR7Q5GH72 579 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 METTL21CQ5VZV1 264 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 ATG9BQ674R7 924 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 NXPE4Q6UWF7 544 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 C17orf64Q86WR6 236 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 FITM2Q8N6M3 262 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 OR4E2Q8NGC2 313 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 ERP27Q96DN0 273 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 ACAT2Q9BWD1 397 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 NMUR2Q9GZQ4 415 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 MYLK2Q9H1R3 596 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 SRMSQ9H3Y6 488 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 EHD1Q9H4M9 534 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 OR6C2Q9NZP2 312 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 TRIM33Q9UPN9 1127 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 PCDHB11Q9Y5F2 797 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 TP53BP1Q12888 1972 aaPredicted RBP20.15■□□□□ 0.82
SND1-214ENST00000489417 SPAG17Q6Q759 2223 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 ULK1O75385 1050 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 SERPINA6P08185 405 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 CDH1P12830 882 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 RXRGP48443 463 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 ABRAXAS2Q15018 415 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 CATSPEREQ5SY80 951 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 PRR23BQ6ZRT6 265 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 RBM12BQ8IXT5 1001 aaKnown RBP20.15■□□□□ 0.82
SND1-214ENST00000489417 AVL9Q8NBF6 648 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 USP7Q93009 1102 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 ELF4Q99607 663 aaPredicted RBP20.15■□□□□ 0.82
SND1-214ENST00000489417 EFCAB11Q9BUY7 163 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 ELOVL6Q9H5J4 265 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 PELI2Q9HAT8 420 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 RIC8BQ9NVN3 520 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 UCKL1Q9NWZ5 548 aa20.15■□□□□ 0.82
SND1-214ENST00000489417 ZNF490Q9ULM2 529 aaPredicted RBP20.15■□□□□ 0.82
SND1-214ENST00000489417 KMT2EQ8IZD2 1858 aa20.14■□□□□ 0.82
SND1-214ENST00000489417 ATP6AP2A0A1C7CYW4 349 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 ATP6AP2O75787 350 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 CHRM5P08912 532 aaPredicted RBP20.14■□□□□ 0.81
SND1-214ENST00000489417 ARRB1P49407 418 aaPredicted RBP20.14■□□□□ 0.81
SND1-214ENST00000489417 DUOXA1Q1HG43 343 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 DEFB133Q30KQ1 61 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 SGO1Q5FBB7 561 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 SPDYAQ5MJ70 313 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 LARP4Q71RC2 724 aaKnown RBP eCLIP20.14■□□□□ 0.818e-8■■□□□ 14.5
SND1-214ENST00000489417 RABEPKQ7Z6M1 372 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 SELENOMQ8WWX9 145 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 TUBGCP3Q96CW5 907 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 AKTIPQ9H8T0 292 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 FARSBQ9NSD9 589 aaKnown RBP20.14■□□□□ 0.81
SND1-214ENST00000489417 CSNK1G3Q9Y6M4 447 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 NCOR1O75376 2440 aa20.14■□□□□ 0.81
SND1-214ENST00000489417 H0YIV9 168 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 SLC28A1O00337 649 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 PRICKLE3O43900 615 aaPredicted RBP20.13■□□□□ 0.81
SND1-214ENST00000489417 CFIP05156 583 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 NCF2P19878 526 aaPredicted RBP20.13■□□□□ 0.81
SND1-214ENST00000489417 PEBP1P30086 187 aaKnown RBP20.13■□□□□ 0.81
SND1-214ENST00000489417 MAZP56270 477 aaKnown RBP20.13■□□□□ 0.81
SND1-214ENST00000489417 HHEXQ03014 270 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 LAPTM5Q13571 262 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 SLBPQ14493 270 aaKnown RBP eCLIP20.13■□□□□ 0.81
SND1-214ENST00000489417 SHBQ15464 509 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 ZNF423Q2M1K9 1284 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 PAGE2BQ5JRK9 111 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 FRG2Q64ET8 278 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 ICE2Q659A1 982 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 OGFOD3Q6PK18 319 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 TMEM26Q6ZUK4 368 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 CLNKQ7Z7G1 428 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 ADGRF3Q8IZF5 1079 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 OR2A1Q8NGT9 310 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 OR2T11Q8NH01 316 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 CEP76Q8TAP6 659 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 FRG2BQ96QU4 278 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 HBEGFQ99075 208 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 SAR1AQ9NR31 198 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 GEMIN8Q9NWZ8 242 aaKnown RBP20.13■□□□□ 0.81
SND1-214ENST00000489417 SPHK1Q9NYA1 384 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 ZDBF2Q9HCK1 2354 aa20.13■□□□□ 0.81
SND1-214ENST00000489417 FAM221BA6H8Z2 402 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 TNFRSF10AO00220 468 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 BTN3A3O00478 584 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 GALR2O43603 387 aaPredicted RBP20.12■□□□□ 0.81
SND1-214ENST00000489417 NOBOXO60393 691 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 CCNDBP1O95273 360 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 PDYNP01213 254 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 PRDX1Q06830 199 aaKnown RBP20.12■□□□□ 0.81
SND1-214ENST00000489417 BNIP3Q12983 259 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 GRIK2Q13002 908 aa20.12■□□□□ 0.81
SND1-214ENST00000489417 HIST2H2ACQ16777 129 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms