RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 KLHL42Q9P2K6 505 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 ASIC3Q9UHC3 531 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 FBXO5Q9UKT4 447 aa22.01■■□□□ 1.11
COL9A3-213ENST00000489045 PRRC2CQ9Y520 2896 aaKnown RBP22.01■■□□□ 1.11
COL9A3-213ENST00000489045 DOPEY2Q9Y3R5 2298 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 LOC105369274A0A096LPK9 316 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 LOC102723532A0A0G2JNH3 316 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 DPM1O60762 260 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 IGHEP01854 428 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 RPA3P35244 121 aaPredicted RBP22■■□□□ 1.11
COL9A3-213ENST00000489045 CD97P48960 835 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 PNLIPRP1P54315 467 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 ARHGAP19Q14CB8 494 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 FAM214AQ32MH5 1076 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 HSP90AA5PQ58FG0 334 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 KCNMB4Q86W47 210 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 OR4N4Q8N0Y3 316 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 CLEC1AQ8NC01 280 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 CD200R1Q8TD46 325 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 GPR21Q99679 349 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 SMAD5Q99717 465 aaKnown RBP22■■□□□ 1.11
COL9A3-213ENST00000489045 ZFYVE21Q9BQ24 234 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 WDR54Q9H977 334 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 MRPS30Q9NP92 439 aaKnown RBP22■■□□□ 1.11
COL9A3-213ENST00000489045 IARS2Q9NSE4 1012 aaKnown RBP22■■□□□ 1.11
COL9A3-213ENST00000489045 DHRS7Q9Y394 339 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 COMMD10Q9Y6G5 202 aa22■■□□□ 1.11
COL9A3-213ENST00000489045 HYKKA2RU49 373 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 MASP2O00187 686 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 DNALI1O14645 258 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-213ENST00000489045 SORBS2O94875 1100 aaKnown RBP21.99■■□□□ 1.11
COL9A3-213ENST00000489045 HAUS5O94927 633 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 MED26O95402 600 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 SLC16A8O95907 504 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ALBP02768 609 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 MPC1LP0DKB6 136 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ENO3P13929 434 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-213ENST00000489045 PGAM1P18669 254 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 OR1D4P47884 311 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 PTK6Q13882 451 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 CRYMQ14894 314 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 NKG7Q16617 165 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ATCAYQ86WG3 371 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 HPS6Q86YV9 775 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 CPNE9Q8IYJ1 553 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 FBXO15Q8NCQ5 510 aaPredicted RBP21.99■■□□□ 1.11
COL9A3-213ENST00000489045 PPFIBP2Q8ND30 876 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ASB11Q8WXH4 323 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 INPP5DQ92835 1189 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 SPSB2Q99619 263 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 MFRPQ9BY79 579 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 SLC26A1Q9H2B4 701 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ANKMY1Q9P2S6 941 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 CTSFQ9UBX1 484 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 ZC3H7BQ9UGR2 993 aaKnown RBP21.99■■□□□ 1.11
COL9A3-213ENST00000489045 TAC3Q9UHF0 121 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 SHANK1Q9Y566 2161 aa21.99■■□□□ 1.11
COL9A3-213ENST00000489045 DOCK10Q96BY6 2186 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 ZNF839A8K0R7 811 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 BANF1O75531 89 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 SYF2O95926 243 aaKnown RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 EIF2S1P05198 315 aaKnown RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 ERVK-10P10266 1014 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 TCP1P17987 556 aaKnown RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 HSD17B2P37059 387 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 DHX9Q08211 1270 aaKnown RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 VWA5B1Q5TIE3 1220 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 JMJD6Q6NYC1 403 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 SHISA6Q6ZSJ9 500 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 GALNT16Q8N428 558 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 CPT1CQ8TCG5 803 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 ZNF480Q8WV37 535 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 SLCO2A1Q92959 643 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 PLCD4Q9BRC7 762 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 AARSD1Q9BTE6 412 aaKnown RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 SOX17Q9H6I2 414 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 LUZP4Q9P127 313 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 CDC23Q9UJX2 597 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 MAU2Q9Y6X3 613 aa21.98■■□□□ 1.11
COL9A3-213ENST00000489045 RP1L1Q8IWN7 2480 aaPredicted RBP21.98■■□□□ 1.11
COL9A3-213ENST00000489045 COL12A1Q99715 3063 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 IGKV1-8A0A0C4DH67 115 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 USP27XA6NNY8 438 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 AGPSO00116 658 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 VPS26AO75436 327 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 MMP11P24347 488 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 ICE2Q659A1 982 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 FBXO42Q6P3S6 717 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 CYHR1Q6ZMK1 362 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 PIWIL4Q7Z3Z4 852 aaKnown RBP21.97■■□□□ 1.11
COL9A3-213ENST00000489045 PAQR7Q86WK9 346 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 EFCAB3Q8N7B9 438 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 RBMXL3Q8N7X1 1067 aaKnown RBP21.97■■□□□ 1.11
COL9A3-213ENST00000489045 ABCF3Q9NUQ8 709 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 STOX2Q9P2F5 926 aaPredicted RBP21.97■■□□□ 1.11
COL9A3-213ENST00000489045 PCYOX1Q9UHG3 505 aa21.97■■□□□ 1.11
COL9A3-213ENST00000489045 E7ENX8 843 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 H0YGG7 62 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 GFYI3L273 518 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 CCNDBP1O95273 360 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms