RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 RSPO4Q2I0M5 234 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 C18orf21Q32NC0 220 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 FAM98BQ52LJ0 330 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 USP39Q53GS9 565 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SPIN4Q56A73 249 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 PAGE3Q5JUK9 113 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 LRIF1Q5T3J3 769 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 C9orf64Q5T6V5 341 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 HIST2H2AA3Q6FI13 130 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CAPN13Q6MZZ7 669 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 PPP4R4Q6NUP7 873 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SLC2A7Q6PXP3 512 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TMEM220Q6QAJ8 160 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 AGTRAPQ6RW13 159 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TMC5Q6UXY8 1006 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ADAMTSL4Q6UY14 1074 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TMEM184AQ6ZMB5 413 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ZBTB49Q6ZSB9 765 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 RFLNAQ6ZTI6 216 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 RBM23Q86U06 439 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 THOC6Q86W42 341 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 LIX1Q8N485 282 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 RAB42Q8N4Z0 105 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 RASGEF1AQ8N9B8 481 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 FAM156AQ8NDB6 213 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 VPS37AQ8NEZ2 397 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 OR56A3Q8NH54 315 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 DNAJB14Q8TBM8 379 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CXorf40AQ8TE69 158 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SETD7Q8WTS6 366 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CANT1Q8WVQ1 401 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SORCS1Q8WY21 1168 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 VPS33AQ96AX1 596 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 MIEF2Q96C03 454 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CXorf40BQ96DE9 158 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TEX37Q96LM6 180 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ZNF597Q96LX8 424 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 GBP5Q96PP8 586 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 OR52E6Q96RD3 313 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 P2RY13Q9BPV8 354 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 HAUS8Q9BT25 410 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 EFCAB11Q9BUY7 163 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SPATA9Q9BWV2 254 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ACPTQ9BZG2 426 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TMEM245Q9H330 911 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 EBF3Q9H4W6 596 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ACTL8Q9H568 366 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 GORASP2Q9H8Y8 452 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 IL1RL2Q9HB29 575 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CD320Q9NPF0 282 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 GEMIN8Q9NWZ8 242 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 FAM120CQ9NX05 1096 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 STOX2Q9P2F5 926 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 VPS29Q9UBQ0 182 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ADGRE2Q9UHX3 823 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 MSRAQ9UJ68 235 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 ATXN7L1Q9ULK2 861 aaPredicted RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CNOT6Q9ULM6 557 aaKnown RBP6.43□□□□□ -1.38
HDLBP-243ENST00000488923 PADI4Q9UM07 663 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 CORO2BQ9UQ03 480 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 AURKCQ9UQB9 309 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 SLC22A14Q9Y267 594 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 MAN2B2Q9Y2E5 1009 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 TSC22D4Q9Y3Q8 395 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 AP4B1Q9Y6B7 739 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 GBF1Q92538 1859 aa6.43□□□□□ -1.38
HDLBP-243ENST00000488923 PTPRSQ13332 1948 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 MTCL1Q9Y4B5 1905 aaKnown RBP6.42□□□□□ -1.38
HDLBP-243ENST00000488923 SCN8AQ9UQD0 1980 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 DNAH12Q6ZR08 3092 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 SMIM31A0A1B0GVY4 71 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 ASPDHA6ND91 283 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 MGAT4DA6NG13 374 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 OR2AG2A6NM03 316 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 ARHGEF33A8MVX0 844 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 FAM220BPB1ANY3 271 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 PRRT4C9JH25 899 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 FOXE1O00358 373 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-243ENST00000488923 GSTA4O15217 222 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 INPP4BO15327 924 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 PI15O43692 258 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 KIF1CO43896 1103 aaKnown RBP6.42□□□□□ -1.38
HDLBP-243ENST00000488923 PDYNP01213 254 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 APODP05090 189 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 RETP07949 1114 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 FAM58BPP0C7Q3 252 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 RAP2AP10114 183 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 EPXP11678 715 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 C6P13671 934 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 ARSAP15289 507 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 ZNF26P17031 533 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-243ENST00000488923 EPORP19235 508 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 GGT1P19440 569 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 ATP6V1B2P21281 511 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 C5AR1P21730 350 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 IL12AP29459 219 aa6.42□□□□□ -1.38
HDLBP-243ENST00000488923 MSX2P35548 267 aaPredicted RBP6.42□□□□□ -1.38
HDLBP-243ENST00000488923 VIPR2P41587 438 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms