RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 GP1BAP07359 652 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 FGF3P11487 239 aaPredicted RBP11.88□□□□□ -0.51
TRAIP-209ENST00000488860 CDH1P12830 882 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 EPB42P16452 691 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 IMPDH1P20839 514 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 BGNP21810 368 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 NAGLUP54802 743 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 CDH13P55290 713 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 DNAJB13P59910 316 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 SPIDRQ14159 915 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 UNC50Q53HI1 259 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 ICE2Q659A1 982 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 LCTLQ6UWM7 567 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 C17orf64Q86WR6 236 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 PLXDC1Q8IUK5 500 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 OR2L3Q8NG85 312 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 ZNF483Q8TF39 744 aaPredicted RBP11.88□□□□□ -0.51
TRAIP-209ENST00000488860 L3HYPDHQ96EM0 354 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 ZDHHC12Q96GR4 267 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 PPM1MQ96MI6 270 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 HAUS8Q9BT25 410 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 PCBD2Q9H0N5 130 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 PRM3Q9NNZ6 103 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 MRPS30Q9NP92 439 aaKnown RBP11.88□□□□□ -0.51
TRAIP-209ENST00000488860 KLHL20Q9Y2M5 609 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 DMXL1Q9Y485 3027 aa11.88□□□□□ -0.51
TRAIP-209ENST00000488860 MN1Q10571 1320 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 RIF1Q5UIP0 2472 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 A8MU76 341 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 AGRPO00253 132 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 SLC30A4O14863 429 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 BIRC5O15392 142 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 H2AFYO75367 372 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 CPNE6O95741 557 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 PVRP15151 417 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 PRDX3P30048 256 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 CCR10P46092 362 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 PIK3CGP48736 1102 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 YBX1P67809 324 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 CFHR1Q03591 330 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 CLCQ05315 142 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 SLC5A12Q1EHB4 618 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 RSPO4Q2I0M5 234 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 KIAA1614Q5VZ46 1190 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 MYLK4Q86YV6 388 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 DCBLD1Q8N8Z6 715 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 OR2A1Q8NGT9 310 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 TRPC4APQ8TEL6 797 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 SLC5A11Q8WWX8 675 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 NEIL2Q969S2 332 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 ATP6V1E2Q96A05 226 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 MAP3K3Q99759 626 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 GATA5Q9BWX5 397 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 GSTO2Q9H4Y5 243 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 SLC6A20Q9NP91 592 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 CUEDC1Q9NWM3 386 aaPredicted RBP11.87□□□□□ -0.51
TRAIP-209ENST00000488860 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 KCNE2Q9Y6J6 123 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 PCNX2A6NKB5 2137 aa11.87□□□□□ -0.51
TRAIP-209ENST00000488860 TLCD2A6NGC4 264 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 D6RAR5 112 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 GIPC1O14908 333 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 KIF1CO43896 1103 aaKnown RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 PRICKLE3O43900 615 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 KATNA1O75449 491 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 NPPBP16860 134 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 MAGP20916 626 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CSRP1P21291 193 aaKnown RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 MLLT3P42568 568 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 LSSP48449 732 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 SEPHS1P49903 392 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CCNG1P51959 295 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 MEF2AQ02078 507 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 ILKQ13418 452 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 RCN2Q14257 317 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CATSPEREQ5SY80 951 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 PHF19Q5T6S3 580 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CACHD1Q5VU97 1274 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 METTL2BQ6P1Q9 378 aaKnown RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 WDR74Q6RFH5 385 aaPredicted RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 FRMD7Q6ZUT3 714 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 TMPRSS9Q7Z410 1059 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 TRIM42Q8IWZ5 723 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 C19orf47Q8N9M1 422 aaKnown RBP11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 CD180Q99467 661 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 DPH7Q9BTV6 452 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 C1QTNF3Q9BXJ4 246 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 SHCBP1LQ9BZQ2 653 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 IPPKQ9H8X2 491 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 ACTR8Q9H981 624 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 GPRC5BQ9NZH0 403 aa11.86□□□□□ -0.51
TRAIP-209ENST00000488860 GVINP1Q7Z2Y8 2422 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms