RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CCL5P13501 91 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 HSD3B1P14060 373 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 CCNA2P20248 432 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 HSD3B2P26439 372 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 STT3AP46977 705 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 TRIM60Q495X7 471 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 PRAMEF9Q5VWM5 478 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
ABCB1-207ENST00000488737 OR4F3Q6IEY1 312 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 DOK6Q6PKX4 331 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 TMEM179BQ7Z7N9 219 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ANKRD46Q86W74 232 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ZDHHC21Q8IVQ6 265 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 HS3ST5Q8IZT8 346 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 SPARTQ8N0X7 666 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 DDHD1Q8NEL9 900 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 OR8J2Q8NGG1 315 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 FBLIM1Q8WUP2 373 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 SNX19Q92543 992 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ELMO1Q92556 727 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 PYCR2Q96C36 320 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 FAM83DQ9H4H8 585 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 ASAH2Q9NR71 780 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 TMEFF2Q9UIK5 374 aaPredicted RBP13.8□□□□□ -0.2
ABCB1-207ENST00000488737 MAPRE3Q9UPY8 281 aa13.8□□□□□ -0.2
ABCB1-207ENST00000488737 A0A1W2PPW3 197 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 TSPAN11A1L157 253 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SGTAO43765 313 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 EPN2O95208 641 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 C8AP07357 584 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 CCDC159P0C7I6 412 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 MYCLP1P12525 358 aaPredicted RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 IL7RP16871 459 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 MATN1P21941 496 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 ITPKAP23677 461 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 DDX6P26196 483 aaKnown RBP eCLIP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 MAPK9P45984 424 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 RECQLP46063 649 aaPredicted RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 ISL1P61371 349 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 DEFB103AP81534 67 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 CD47Q08722 323 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 CPZQ66K79 652 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 GTF2IRD2BQ6EKJ0 949 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 FBXO46Q6PJ61 603 aaPredicted RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SERPINA13PQ6UXR4 307 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 Q6ZVU0 165 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 GPR155Q7Z3F1 870 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 GTF2IRD2Q86UP8 949 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SYT12Q8IV01 421 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 TRAM1L1Q8N609 369 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 CHST14Q8NCH0 376 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 FNDC8Q8TC99 324 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 PHF12Q96QT6 1004 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SPATA9Q9BWV2 254 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 NAA50Q9GZZ1 169 aaKnown RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 TM9SF3Q9HD45 589 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 AASDHPPTQ9NRN7 309 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SPATA6Q9NWH7 488 aaPredicted RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 CD84Q9UIB8 345 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 RPS6KA6Q9UK32 745 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 ERVW-1Q9UQF0 538 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 RUVBL1Q9Y265 456 aaKnown RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 AP1M2Q9Y6Q5 423 aa13.79□□□□□ -0.2
ABCB1-207ENST00000488737 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
ABCB1-207ENST00000488737 SH3PXD2BA1X283 911 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 NRG2O14511 850 aaPredicted RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 FPGTO14772 594 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 EFCAB14O75071 495 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 PSIP1O75475 530 aaKnown RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 GJA1P17302 382 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 GPX2P18283 190 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 MAP4P27816 1152 aaKnown RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 HNF4AP41235 474 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 ENTPD1P49961 510 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 GALK1P51570 392 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 IRF8Q02556 426 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 NFATC3Q12968 1075 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 MEP1AQ16819 746 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 UGT8Q16880 541 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 CTU2Q2VPK5 515 aaKnown RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 FGD3Q5JSP0 725 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 TMEM25Q86YD3 366 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 CPA6Q8N4T0 437 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 SETD9Q8NE22 299 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 OR2A12Q8NGT7 310 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 TBC1D15Q8TC07 691 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 CLP1Q92989 425 aaKnown RBP13.78□□□□□ -0.2
ABCB1-207ENST00000488737 BORCS5Q969J3 196 aa13.78□□□□□ -0.2
ABCB1-207ENST00000488737 EGLN2Q96KS0 407 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms