RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 HBQ1P09105 142 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 MC1RQ01726 317 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 TAP2Q03519 686 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 ERV3-1Q14264 604 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 TBR1Q16650 682 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 PHKG1Q16816 387 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 ZC3H12BQ5HYM0 836 aaKnown RBP22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 TLDC1Q6P9B6 456 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 ZUFSPQ96AP4 578 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 SELENOSQ9BQE4 189 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 ARHGAP9Q9BRR9 750 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 ZDHHC18Q9NUE0 388 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 STOX2Q9P2F5 926 aaPredicted RBP22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 TXNDC16Q9P2K2 825 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 DHCR7Q9UBM7 475 aaKnown RBP22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 PCDHGA6Q9Y5G7 932 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 AP1M2Q9Y6Q5 423 aa22.72■■□□□ 1.23
RHBDD3-205ENST00000488106 A0A0J9YVX5 310 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 PABPN1LA6NDY0 278 aaKnown RBP22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 TARM1B6A8C7 271 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 CCNDBP1O95273 360 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 PRB1P04280 392 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 GSTA2P09210 222 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 ZNF37AP17032 561 aaPredicted RBP22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 TAS2R39P59534 338 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 TBPL1P62380 186 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 RPS15P62841 145 aaKnown RBP22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 ICE2Q659A1 982 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 ZNF517Q6ZMY9 492 aaPredicted RBP22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 CTAGE3PQ8IX95 158 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 SEC14L1Q92503 715 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 NDC1Q9BTX1 674 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 PARVBQ9HBI1 364 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 STARD5Q9NSY2 213 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 TXLNGQ9NUQ3 528 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 SRPK3Q9UPE1 567 aa22.71■■□□□ 1.23
RHBDD3-205ENST00000488106 TNRC6AQ8NDV7 1962 aaKnown RBP22.7■■□□□ 1.23
RHBDD3-205ENST00000488106 SPTA1P02549 2419 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 CDC14CA4D256 554 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 FAM159BA6NKW6 160 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 SLC16A5O15375 505 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 CREG1O75629 220 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 PTPN4P29074 926 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 VSX2P58304 361 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 NAA25Q14CX7 972 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 LINC00303Q3SY05 128 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 FAM198BQ6UWH4 519 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 TMEM207Q6UWW9 146 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 LRRC56Q8IYG6 542 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 ENDOVQ8N8Q3 282 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 ALKBH8Q96BT7 664 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 MED8Q96G25 268 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 CCDC138Q96M89 665 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 CPNE1Q99829 537 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 MCMBPQ9BTE3 642 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 LRRC4CQ9HCJ2 640 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 CCDC177Q9NQR7 707 aaPredicted RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 DMGDHQ9UI17 866 aaKnown RBP22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 KLK4Q9Y5K2 254 aa22.7■■□□□ 1.22
RHBDD3-205ENST00000488106 OR2A25A4D2G3 310 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 FAM87AP0C7U9 286 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 AGXTP21549 392 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 STX2P32856 288 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 SLC12A2P55011 1212 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 DEFB109BQ30KR1 87 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 ZNF385CQ66K41 422 aaPredicted RBP22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 FRMPD2BQ6IN97 320 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 RHBDD2Q6NTF9 364 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 BORAQ6PGQ7 559 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 RNF44Q7L0R7 432 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 ADCK2Q7Z695 626 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 CEP97Q8IW35 865 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 FBF1Q8TES7 1133 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 CATSPER2Q96P56 530 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 GPR87Q9BY21 358 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 ATG10Q9H0Y0 220 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 CAB39LQ9H9S4 337 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 ARL15Q9NXU5 204 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 IKZF3Q9UKT9 509 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 MTO1Q9Y2Z2 717 aaKnown RBP22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 SCN2AQ99250 2005 aa22.69■■□□□ 1.22
RHBDD3-205ENST00000488106 IGKV1-8A0A0C4DH67 115 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 NPEPPSL1A6NEC2 478 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 C9J4A7 227 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 C1QAP02745 245 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 FURINP09958 794 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 HIST1H2AGP0C0S8 130 aaPredicted RBP22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 HIST1H2ADP20671 130 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 GP5P40197 560 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 NFKB2Q00653 900 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 PRDX1Q06830 199 aaKnown RBP22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 SLC9A5Q14940 896 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 EFTUD2Q15029 972 aaKnown RBP eCLIP22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 KBTBD12Q3ZCT8 623 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 FAM69BQ5VUD6 431 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 PRAMEF13Q5VWM6 474 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 AGTRAPQ6RW13 159 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 PPM1NQ8N819 430 aa22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 LSM14AQ8ND56 463 aaKnown RBP22.68■■□□□ 1.22
RHBDD3-205ENST00000488106 PROKR1Q8TCW9 393 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms