RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MYADMQ96S97 322 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 RAD9AQ99638 391 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 GTPBP2Q9BX10 602 aaKnown RBP4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 S1PR5Q9H228 398 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 COPS7BQ9H9Q2 264 aaPredicted RBP4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 DNAJC4Q9NNZ3 241 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 KCNK7Q9Y2U2 307 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 ZFP37Q9Y6Q3 630 aaPredicted RBP4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 MYOM1P52179 1685 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 KNDC1Q76NI1 1749 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 CRYBG1Q9Y4K1 1723 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 COL14A1Q05707 1796 aaKnown RBP4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 CASZ1Q86V15 1759 aa4.63□□□□□ -1.67
PRPF38A-203ENST00000487160 SMTNL1A8MU46 457 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 PI4K2BG5E9Z4 385 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 H0YAE9 185 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 C16orf97H3BN30 126 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 DNM1LO00429 736 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 PSMD14O00487 310 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 CAPN9O14815 690 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 MOCS3O95396 460 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 PLA2G4BP0C869 781 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 HAPLN1P10915 354 aaPredicted RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 HSPA8P11142 646 aaKnown RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 NR1D1P20393 614 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 MSH3P20585 1137 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 SP100P23497 879 aaPredicted RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 DGKAP23743 735 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ACAT1P24752 427 aaKnown RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 EPHA2P29317 976 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 DVL1P1P54792 670 aaPredicted RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 TUBB4BP68371 445 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ZNF415Q09FC8 603 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 E2F5Q15329 346 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 MCMDC2Q4G0Z9 681 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 NHSL2Q5HYW2 709 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ELFN2Q5R3F8 820 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 SHEQ5VZ18 495 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 CAPRIN2Q6IMN6 1127 aaKnown RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 C11orf63Q6NUN7 778 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 SPSB3Q6PJ21 355 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 EXOC3L1Q86VI1 746 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 IQCA1Q86XH1 822 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 TMEM139Q8IV31 216 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 NAGSQ8N159 534 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 OLIG1Q8TAK6 271 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ZNF473Q8WTR7 871 aaKnown RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 CCDC107Q8WV48 283 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 CD101Q93033 1021 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 THOC1Q96FV9 657 aaKnown RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ERO1AQ96HE7 468 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 SPATA33Q96N06 139 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 RTP3Q9BQQ7 232 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 KRTAP4-5Q9BYR2 181 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 SLC2A11Q9BYW1 496 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 GKN1Q9NS71 199 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 ZNF701Q9NV72 531 aaPredicted RBP4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 TMED3Q9Y3Q3 217 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 JRKLQ9Y4A0 524 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 NPHP3Q7Z494 1330 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 DISP2A7MBM2 1401 aa4.62□□□□□ -1.67
PRPF38A-203ENST00000487160 NRKQ7Z2Y5 1582 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 UTRNP46939 3433 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 TRPM3Q9HCF6 1732 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 RGPD3A6NKT7 1758 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 RGPD4Q7Z3J3 1758 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 SBF2Q86WG5 1849 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 A0A1W2PPK0 400 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 DENND3A2RUS2 1198 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 RNASEH1O60930 286 aaKnown RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 INHBAP08476 426 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 GNAZP19086 355 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 ATP5DP30049 168 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 KRT2P35908 639 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 MNDAP41218 407 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 HOXA1P49639 335 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 PDX1P52945 283 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 CDH11P55287 796 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 NFE2L1Q14494 772 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 UGCGQ16739 394 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 SPDYCQ5MJ68 293 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 C11orf88Q6PI97 169 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 ENPP7Q6UWV6 458 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 MSANTD1Q6ZTZ1 278 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 ANO5Q75V66 913 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 FOXP4Q8IVH2 680 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 BMPERQ8N8U9 685 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 MAB21L3Q8N8X9 362 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 OR2T12Q8NG77 320 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 VANGL1Q8TAA9 524 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 C9orf43Q8TAL5 461 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 GRAPLQ8TC17 118 aaPredicted RBP4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 GRHL3Q8TE85 626 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 HEXDCQ8WVB3 486 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 ST6GALNAC6Q969X2 333 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 HES6Q96HZ4 224 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 INPP5KQ9BT40 448 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 RETREG1Q9H6L5 497 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 A4GALTQ9NPC4 353 aa4.61□□□□□ -1.67
PRPF38A-203ENST00000487160 DDX43Q9NXZ2 648 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms