RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ZNF839A8K0R7 811 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 DNALI1O14645 258 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 CNOT3O75175 753 aaKnown RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 TTC4O95801 387 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 MPC1LP0DKB6 136 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 PGAM1P18669 254 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 ITGAXP20702 1163 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 PSMB5P28074 263 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 FAM214AQ32MH5 1076 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 TTLL10Q6ZVT0 673 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 OVCH1Q7RTY7 1134 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 TTC29Q8NA56 475 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 ASB11Q8WXH4 323 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 FER1L6-AS2Q96M78 137 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 SLC30A3Q99726 388 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 MIPEPQ99797 713 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 FBXO6Q9NRD1 293 aaPredicted RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 CUTCQ9NTM9 273 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 TRMT1Q9NXH9 659 aaKnown RBP13.8□□□□□ -0.2
CLDN11-207ENST00000486975 ASIC3Q9UHC3 531 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 DHRS7Q9Y394 339 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 ZNF451Q9Y4E5 1061 aa13.8□□□□□ -0.2
CLDN11-207ENST00000486975 SETXQ7Z333 2677 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 GFYI3L273 518 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 UMODP07911 640 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 ALAS2P22557 587 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 IVDP26440 423 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 CMPK1P30085 196 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 OTX2P32243 289 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 SKIV2L2P42285 1042 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 CD97P48960 835 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 RELAQ04206 551 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 FASTKQ14296 549 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 CRYMQ14894 314 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 SYDE1Q6ZW31 735 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 KCNMB4Q86W47 210 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 FDCSPQ8NFU4 85 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 CD200R1Q8TD46 325 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 INPP5DQ92835 1189 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 MIB2Q96AX9 1013 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 PDLIM2Q96JY6 352 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 EBNA1BP2Q99848 306 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 ZFYVE21Q9BQ24 234 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 AARSD1Q9BTE6 412 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 NXT1Q9UKK6 140 aaKnown RBP13.79□□□□□ -0.2
CLDN11-207ENST00000486975 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
CLDN11-207ENST00000486975 PEX12O00623 359 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 KLHL41O60662 606 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 VPS26AO75436 327 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 HAUS5O94927 633 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 CCNDBP1O95273 360 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SLC16A8O95907 504 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 MCM3P25205 808 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 RPA3P35244 121 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PNLIPRP1P54315 467 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SOX8P57073 446 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SLC9A5Q14940 896 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SPANXN3Q5MJ09 141 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 DCAF10Q5QP82 559 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 WASHC2DQ5SRD0 308 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 CYHR1Q6ZMK1 362 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 KIAA0408Q6ZU52 694 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PPP1R32Q7Z5V6 425 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 GALNT7Q86SF2 657 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 CNTN4Q8IWV2 1026 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 C2CD4AQ8NCU7 369 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-207ENST00000486975 ZNF480Q8WV37 535 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 RUNDC3BQ96NL0 473 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PKP4Q99569 1192 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 GPR21Q99679 349 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PLCD4Q9BRC7 762 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 DPH7Q9BTV6 452 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 SLC6A20Q9NP91 592 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 P4HTMQ9NXG6 502 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 UTP6Q9NYH9 597 aaKnown RBP13.78□□□□□ -0.2
CLDN11-207ENST00000486975 C5AR2Q9P296 337 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 PCSK5Q92824 1860 aa13.78□□□□□ -0.2
CLDN11-207ENST00000486975 IGKV1-8A0A0C4DH67 115 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 HYKKA2RU49 373 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 USP27XA6NNY8 438 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 E7ENX8 843 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 NRP2O60462 931 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 DPM1O60762 260 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 MMP11P24347 488 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 VSX2P58304 361 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 YBX1P67809 324 aaKnown RBP13.77□□□□□ -0.21
CLDN11-207ENST00000486975 ABATP80404 500 aa13.77□□□□□ -0.21
CLDN11-207ENST00000486975 PRR20EP86478 221 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms