RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DTWD1Q8N5C7 304 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 TEX19Q8NA77 164 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 PROKR1Q8TCW9 393 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 ZNF480Q8WV37 535 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-204ENST00000486023 ASB11Q8WXH4 323 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 C17orf62Q9BQA9 187 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 DPH5Q9H2P9 285 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 CUTCQ9NTM9 273 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 TAS2R13Q9NYV9 303 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 MAU2Q9Y6X3 613 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 COL6A6A6NMZ7 2263 aa16.92■□□□□ 0.3
COL6A1-204ENST00000486023 LOC105369274A0A096LPK9 316 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 LOC102723532A0A0G2JNH3 316 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 SMAPO00193 183 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 ENO3P13929 434 aaPredicted RBP16.91■□□□□ 0.3
COL6A1-204ENST00000486023 OR1D4P47884 311 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 PDIA2Q13087 525 aaKnown RBP16.91■□□□□ 0.3
COL6A1-204ENST00000486023 ATP1A4Q13733 1029 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 TCTE1Q5JU00 501 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 TEDDM1Q5T9Z0 273 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 PAQR3Q6TCH7 311 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 CAPN12Q6ZSI9 719 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 SHISA6Q6ZSJ9 500 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 NEK10Q6ZWH5 1172 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 RAB43Q86YS6 212 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 TMEM151BQ8IW70 566 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 OR4N4Q8N0Y3 316 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 KLHL42Q9P2K6 505 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 RNF14Q9UBS8 474 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 ADAMTS6Q9UKP5 1117 aa16.91■□□□□ 0.3
COL6A1-204ENST00000486023 A0A1B0GX78 115 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 HYKKA2RU49 373 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 ZNF839A8K0R7 811 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 GFYI3L273 518 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 SRPX2O60687 465 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 KLF7O75840 302 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 SEC31AO94979 1220 aaKnown RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 FKBP9O95302 570 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 HSD17B2P37059 387 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 RPL21P46778 160 aaKnown RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 RGS4P49798 205 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 TLE1Q04724 770 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 C2orf54Q08AI8 447 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 PDAP1Q13442 181 aaKnown RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 ARHGAP19Q14CB8 494 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 ICE2Q659A1 982 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 FBXO42Q6P3S6 717 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 SYT10Q6XYQ8 523 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 APLFQ8IW19 511 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-204ENST00000486023 MYO1HQ8N1T3 1032 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 FBXO36Q8NEA4 188 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 ADAMTS17Q8TE56 1095 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 COL26A1Q96A83 441 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 LINGO1Q96FE5 620 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 DHRS4Q9BTZ2 278 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 SLC25A23Q9BV35 468 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 YIPF2Q9BWQ6 316 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 TEX264Q9Y6I9 313 aa16.9■□□□□ 0.3
COL6A1-204ENST00000486023 E7ENX8 843 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 MASP2O00187 686 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PEX12O00623 359 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 DSCR3O14972 297 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 CNOT3O75175 753 aaKnown RBP16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PDGFAP04085 211 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 SKIV2L2P42285 1042 aaKnown RBP16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PGDP52209 483 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 TIAL1Q01085 375 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL6A1-204ENST00000486023 TAP2Q03519 686 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 KCNC4Q03721 635 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 SSPNQ14714 243 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 FASTKD3Q14CZ7 662 aaKnown RBP16.89■□□□□ 0.29
COL6A1-204ENST00000486023 FAM214AQ32MH5 1076 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 HECTD2Q5U5R9 776 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 TCTN3Q6NUS6 607 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 MBOAT1Q6ZNC8 495 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PLD3Q8IV08 490 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PRSS58Q8IYP2 241 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 MCOLN3Q8TDD5 553 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PTERQ96BW5 349 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 CABS1Q96KC9 395 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 ZFYVE21Q9BQ24 234 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 WDR83Q9BRX9 315 aaKnown RBP16.89■□□□□ 0.29
COL6A1-204ENST00000486023 ATG10Q9H0Y0 220 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 EPN3Q9H201 632 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 PLAC1Q9HBJ0 212 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 SLC22A11Q9NSA0 550 aa16.89■□□□□ 0.29
COL6A1-204ENST00000486023 TENM4Q6N022 2769 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 PABPN1LA6NDY0 278 aaKnown RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 H0YGG7 62 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 CCNDBP1O95273 360 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 STATHP02808 62 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 PIM1P11309 404 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 ARF3P61204 181 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 PRDX1Q06830 199 aaKnown RBP16.88■□□□□ 0.29
COL6A1-204ENST00000486023 KLRB1Q12918 225 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 KIAA0408Q6ZU52 694 aa16.88■□□□□ 0.29
COL6A1-204ENST00000486023 CNTN4Q8IWV2 1026 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms