RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PCDHB11Q9Y5F2 797 aa11.43□□□□□ -0.58
APTX-227ENST00000485479 MDC1Q14676 2089 aaKnown RBP11.42□□□□□ -0.58
APTX-227ENST00000485479 A0A0J9YVX5 310 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 TMEM150CB9EJG8 249 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 H7BY64 318 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 MATN2O00339 956 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 CTIFO43310 598 aaKnown RBP11.42□□□□□ -0.58
APTX-227ENST00000485479 ANXA5P08758 320 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 MTHFD2P13995 350 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 CREB1P16220 341 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 SLC5A2P31639 672 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 AP1S2P56377 157 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 ATP6V0D1P61421 351 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 CLPPQ16740 277 aaPredicted RBP11.42□□□□□ -0.58
APTX-227ENST00000485479 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 TECRLQ5HYJ1 363 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 CLEC14AQ86T13 490 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 HMGCLL1Q8TB92 370 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 FBXL8Q96CD0 374 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 PHF21BQ96EK2 531 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 PRAP1Q96NZ9 151 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 CD180Q99467 661 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 TWSG1Q9GZX9 223 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 AKAP7Q9P0M2 348 aaPredicted RBP11.42□□□□□ -0.58
APTX-227ENST00000485479 TMEM216Q9P0N5 145 aa11.42□□□□□ -0.58
APTX-227ENST00000485479 APC2O95996 2303 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 FEZF1A0PJY2 475 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CCDC151A5D8V7 595 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 HAT1O14929 419 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CCNT2O60583 730 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 KERAO60938 352 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CDH16O75309 829 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 WDR47O94967 919 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SIX3O95343 332 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 MT-ND3P03897 115 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 ENO2P09104 434 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 SBK3P0C264 359 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CDH1P12830 882 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 KRT4P19013 534 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 ARHGAP19Q14CB8 494 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 TGIF1Q15583 401 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 PFKFB4Q16877 469 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SLC5A12Q1EHB4 618 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CATSPEREQ5SY80 951 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CEP85LQ5SZL2 805 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 LGSNQ5TDP6 509 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 FRMPD2BQ6IN97 320 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 FIGLAQ6QHK4 219 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 UNQ6494/PRO21346Q6UXR6 183 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 ZFAND4Q86XD8 727 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SRRM1Q8IYB3 904 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 D2HGDHQ8N465 521 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 MYRIPQ8NFW9 859 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 STAG3L4Q8TBR4 150 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 NXPE2Q96DL1 559 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 MTBPQ96DY7 904 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 MACROD1Q9BQ69 325 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SPNS1Q9H2V7 528 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 PDE7BQ9NP56 450 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 FETUBQ9UGM5 382 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 LOC105369274A0A096LPK9 316 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 LOC102723532A0A0G2JNH3 316 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 POLR1CO15160 346 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 TOX3O15405 576 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 TLX3O43711 291 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 NTRK1P04629 796 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 GFAPP14136 432 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 NPPBP16860 134 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 RBMS1P29558 406 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 PRDX1Q06830 199 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 RTP5Q14D33 572 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 ACAP2Q15057 778 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 CAPN13Q6MZZ7 669 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 PWWP2BQ6NUJ5 590 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 TIFABQ6ZNK6 161 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 THOC6Q86W42 341 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 OR4N4Q8N0Y3 316 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 ZNF740Q8NDX6 193 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 OR56A3Q8NH54 315 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 NEIL2Q969S2 332 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SLC22A18Q96BI1 424 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SGPP1Q9BX95 441 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SPRTNQ9H040 489 aaPredicted RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 IRAK4Q9NWZ3 460 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 SEMA5BQ9P283 1151 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
APTX-227ENST00000485479 BTRCQ9Y297 605 aa11.41□□□□□ -0.58
APTX-227ENST00000485479 AHCTF1Q8WYP5 2266 aa11.4□□□□□ -0.58
APTX-227ENST00000485479 E7EQ34 232 aa11.4□□□□□ -0.58
APTX-227ENST00000485479 SPAG7O75391 227 aa11.4□□□□□ -0.58
APTX-227ENST00000485479 ERLIN1O75477 346 aa11.4□□□□□ -0.58
APTX-227ENST00000485479 EIF2S1P05198 315 aaKnown RBP11.4□□□□□ -0.58
APTX-227ENST00000485479 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
APTX-227ENST00000485479 CMPK1P30085 196 aa11.4□□□□□ -0.58
APTX-227ENST00000485479 SNRPNP63162 240 aaKnown RBP11.4□□□□□ -0.58
APTX-227ENST00000485479 ILF2Q12905 390 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms