RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 STT3BQ8TCJ2 826 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 FAM136AQ96C01 138 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 FOPNLQ96NB1 174 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 BIRC8Q96P09 236 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 CRB3Q9BUF7 120 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 ACAT2Q9BWD1 397 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 SYBUQ9NX95 663 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 MRFAP1Q9Y605 127 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 CNTRLQ7Z7A1 2325 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 DOPEY1Q5JWR5 2465 aa18.37■□□□□ 0.53
COL27A1-205ENST00000485397 TEX15Q9BXT5 2789 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 PRRC2CQ9Y520 2896 aaKnown RBP18.36■□□□□ 0.53
COL27A1-205ENST00000485397 KLHL18O94889 574 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 VAPBO95292 243 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 DCTP40126 519 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 CCNFP41002 786 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 KCNJ1P48048 391 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 KLC1Q07866 573 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 MEI1Q5TIA1 1274 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 FBXO42Q6P3S6 717 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 LINC00696Q6ZRV3 163 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 GRHL3Q8TE85 626 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 LPGAT1Q92604 370 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 MIEF2Q96C03 454 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 C8orf44Q96CB5 159 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 KIFC1Q9BW19 673 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 SPATA7Q9P0W8 599 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 GALPQ9UBC7 116 aa18.36■□□□□ 0.53
COL27A1-205ENST00000485397 DRG1Q9Y295 367 aaKnown RBP18.36■□□□□ 0.53
COL27A1-205ENST00000485397 POLEQ07864 2286 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 TCRBV7S3A2A0A539 114 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 OR2A25A4D2G3 310 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 E2F3O00716 465 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 ZGLP1P0C6A0 271 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 TSFMP43897 325 aaKnown RBP18.35■□□□□ 0.53
COL27A1-205ENST00000485397 CARSP49589 748 aaKnown RBP18.35■□□□□ 0.53
COL27A1-205ENST00000485397 OCA2Q04671 838 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 GBX1Q14549 363 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 ZNF169Q14929 603 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-205ENST00000485397 VWA2Q5GFL6 755 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 DRICH1Q6PGQ1 229 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-205ENST00000485397 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 MAGEC3Q8TD91 643 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 VPS50Q96JG6 964 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 DPH7Q9BTV6 452 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 TSGA10Q9BZW7 698 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 SYNPO2LQ9H987 977 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 ZNF160Q9HCG1 818 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 ZNF282Q9UDV7 671 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-205ENST00000485397 C3orf18Q9UK00 162 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 CRYL1Q9Y2S2 319 aa18.35■□□□□ 0.53
COL27A1-205ENST00000485397 ARHGEF33A8MVX0 844 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 H0YGG7 62 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 FFAR3O14843 346 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 GPR42O15529 346 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 MATN4O95460 622 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 HPP00738 406 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 ACPPP15309 386 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 CMPK1P30085 196 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 TERF1P54274 439 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 ARF3P61204 181 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-205ENST00000485397 CDC16Q13042 620 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 TYSND1Q2T9J0 566 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 MUM1Q2TAK8 710 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 PRTGQ2VWP7 1150 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 ACSBG2Q5FVE4 666 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.34■□□□□ 0.53
COL27A1-205ENST00000485397 MRNIPQ6NTE8 343 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 PRMT9Q6P2P2 845 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 LRRC8BQ6P9F7 803 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 SUSD1Q6UWL2 747 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 ISLR2Q6UXK2 745 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 GSTA5Q7RTV2 222 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 SDCCAG8Q86SQ7 713 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-205ENST00000485397 LAPTM4BQ86VI4 370 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 SPNS2Q8IVW8 549 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 OR9A1PQ8NGU1 263 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 ZFYVE21Q9BQ24 234 aa18.34■□□□□ 0.53
COL27A1-205ENST00000485397 AP3B1O00203 1094 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 MAP2K7O14733 419 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 ERVK-10P10266 1014 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 CHRM3P20309 590 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 FBLP22087 321 aaKnown RBP18.33■□□□□ 0.52
COL27A1-205ENST00000485397 CDC25BP30305 580 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 MFAP5Q13361 173 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 TSTA3Q13630 321 aaPredicted RBP18.33■□□□□ 0.52
COL27A1-205ENST00000485397 TLR1Q15399 786 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 ATG9BQ674R7 924 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 C4orf22Q6V702 233 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 COG1Q8WTW3 980 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 FAR1Q8WVX9 515 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 CABS1Q96KC9 395 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 LMF1Q96S06 567 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 SOX13Q9UN79 622 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 OSGIN2Q9Y236 505 aa18.33■□□□□ 0.52
COL27A1-205ENST00000485397 IGLV3-12A0A075B6K2 115 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 IGKV1-8A0A0C4DH67 115 aa18.32■□□□□ 0.52
COL27A1-205ENST00000485397 H3BMM5 538 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms