RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 FJX1Q86VR8 437 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 OR52K1Q8NGK4 314 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 MIEF2Q96C03 454 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 IL17FQ96PD4 163 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 TAAR6Q96RI8 345 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 RNF32Q9H0A6 362 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
HDAC6-227ENST00000485102 AMFRQ9UKV5 643 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 DUSP10Q9Y6W6 482 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 FAM169AQ9Y6X4 670 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 OR2A25A4D2G3 310 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PRMT5O14744 637 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 KPNA5O15131 536 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PHF2O75151 1096 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 BMP10O95393 424 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 MED26O95402 600 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 C1orf105O95561 183 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 SERPINA7P05543 415 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PRR35P0CG20 571 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 COX6A1P12074 109 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PTGER4P35408 488 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 CSE1LP55060 971 aaKnown RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 VSX2P58304 361 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 ARG2P78540 354 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 MUM1Q2TAK8 710 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PRTGQ2VWP7 1150 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 FASTKD1Q53R41 847 aaKnown RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 AARS2Q5JTZ9 985 aaKnown RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 MTFR2Q6P444 385 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PEX26Q7Z412 305 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 RAB42Q8N4Z0 105 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 C2orf73Q8N5S3 287 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 DNAAF3Q8N9W5 541 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 OR2L3Q8NG85 312 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 DNAJB8Q8NHS0 232 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 CFAP61Q8NHU2 1237 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 LKAAEAR1Q8TD35 194 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 ITLN2Q8WWU7 325 aaPredicted RBP12.41□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF778Q96MU6 729 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 PANX3Q96QZ0 392 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 DESI2Q9BSY9 194 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 TMEM121Q9BTD3 319 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 TGIF2Q9GZN2 237 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF160Q9HCG1 818 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 ABI3Q9P2A4 366 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 SLC2A6Q9UGQ3 507 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 C3orf18Q9UK00 162 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 CDC14AQ9UNH5 594 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 FBN2P35556 2912 aa12.41□□□□□ -0.42
HDAC6-227ENST00000485102 SCN2AQ99250 2005 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 LOC102723996A0A087X1L8 192 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 LOC105369274A0A096LPK9 316 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 NSG1A0A0A6YYJ2 146 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 LOC102723532A0A0G2JNH3 316 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 IQCF5A8MTL0 148 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 FDFT1P37268 417 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 CCNFP41002 786 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 TTPAP49638 278 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 AP2B1P63010 937 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 RELAQ04206 551 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 SEMA3AQ14563 771 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 TMED2Q15363 201 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 FRMPD2BQ6IN97 320 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 FBXO42Q6P3S6 717 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 OR4N4Q8N0Y3 316 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 MPP5Q8N3R9 675 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-227ENST00000485102 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 MESP1Q9BRJ9 268 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 P2RY12Q9H244 342 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 CHST11Q9NPF2 352 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 C14orf105Q9NVL8 296 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 ZC3H7BQ9UGR2 993 aaKnown RBP12.4□□□□□ -0.42
HDAC6-227ENST00000485102 GUCA1BQ9UMX6 200 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 MRPS2Q9Y399 296 aaKnown RBP12.4□□□□□ -0.42
HDAC6-227ENST00000485102 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
HDAC6-227ENST00000485102 MAU2Q9Y6X3 613 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 CPAMD8Q8IZJ3 1885 aa12.4□□□□□ -0.42
HDAC6-227ENST00000485102 IGHV1-45A0A0A0MS14 117 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 GRID2IPA4D2P6 1211 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 IDSB3KWA1 339 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 PRPF4O43172 522 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 CRYABP02511 175 aaKnown RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 MYBL2P10244 700 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ERGP11308 486 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ICAM2P13598 275 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 RPS3P23396 243 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 CXCR2P25025 360 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 CA7P43166 264 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 EMP2P54851 167 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 RIPPLY3P57055 190 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 PRAMEP78395 509 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms