RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 F8A1P23610 371 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 RPS15P62841 145 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 YBX1P67809 324 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 POU4F1Q01851 419 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 USP10Q14694 798 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 PHKG1Q16816 387 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 PTCHD3Q3KNS1 767 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 C1orf189Q5VU69 101 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 ICE2Q659A1 982 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 TLDC1Q6P9B6 456 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 CYS1Q717R9 158 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 DSELQ8IZU8 1212 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 NKAPQ8N5F7 415 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 LRFN5Q96NI6 719 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 RBBP8Q99708 897 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 ARHGAP9Q9BRR9 750 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 NDC1Q9BTX1 674 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 CHST8Q9H2A9 424 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 GPAMQ9HCL2 828 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 SLC6A20Q9NP91 592 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 PCMTD2Q9NV79 361 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 UTP6Q9NYH9 597 aaKnown RBP18.37■□□□□ 0.53
SNX17-206ENST00000484886 SRPK3Q9UPE1 567 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 PCM1Q15154 2024 aa18.37■□□□□ 0.53
SNX17-206ENST00000484886 A0A0J9YVX5 310 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 NPEPPSL1A6NEC2 478 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 C21orf140B9A014 251 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 CTSVO60911 334 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 AGXTP21549 392 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 PHBP35232 272 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 SPRP35270 261 aaPredicted RBP18.36■□□□□ 0.53
SNX17-206ENST00000484886 VSX2P58304 361 aaPredicted RBP18.36■□□□□ 0.53
SNX17-206ENST00000484886 TBPL1P62380 186 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 CEP97Q8IW35 865 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 TTC29Q8NA56 475 aaPredicted RBP18.36■□□□□ 0.53
SNX17-206ENST00000484886 EXTL1Q92935 676 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 MRRFQ96E11 262 aaKnown RBP18.36■□□□□ 0.53
SNX17-206ENST00000484886 FMO2Q99518 471 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 TSPYL1Q9H0U9 437 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 ATG10Q9H0Y0 220 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 ACTL8Q9H568 366 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 CAB39LQ9H9S4 337 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 NDOR1Q9UHB4 597 aa18.36■□□□□ 0.53
SNX17-206ENST00000484886 ANKRD12Q6UB98 2062 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 C9J4A7 227 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 NRP2O60462 931 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 GUCA1CO95843 209 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 EIF2S1P05198 315 aaKnown RBP18.35■□□□□ 0.53
SNX17-206ENST00000484886 RORAP35398 523 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 PRDX1Q06830 199 aaKnown RBP18.35■□□□□ 0.53
SNX17-206ENST00000484886 CDC20Q12834 499 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 NAB1Q13506 487 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 NAE1Q13564 534 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 ERV3-1Q14264 604 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 SLMAPQ14BN4 828 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 EFTUD2Q15029 972 aaKnown RBP eCLIP18.35■□□□□ 0.531e-11■■■■□ 19.9
SNX17-206ENST00000484886 TCTE1Q5JU00 501 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 GRTP1Q5TC63 336 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 PRAMEF13Q5VWM6 474 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 AGTRAPQ6RW13 159 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 TMEM207Q6UWW9 146 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 RUFY1Q96T51 708 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 MCMBPQ9BTE3 642 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 GPR87Q9BY21 358 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 POPDC3Q9HBV1 291 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 STARD5Q9NSY2 213 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 ANKMY1Q9P2S6 941 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 DHCR7Q9UBM7 475 aaKnown RBP18.35■□□□□ 0.53
SNX17-206ENST00000484886 KLK4Q9Y5K2 254 aa18.35■□□□□ 0.53
SNX17-206ENST00000484886 OR2A25A4D2G3 310 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 CDC7O00311 574 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 TERTO14746 1132 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 ATXN7O15265 892 aaPredicted RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 PHGDHO43175 533 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 FAM155BO75949 473 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 ITGB2P05107 769 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 ENO2P09104 434 aaPredicted RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 STMN1P16949 149 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 ALAS2P22557 587 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 AP1S2P56377 157 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 RPS18P62269 152 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 ABATP80404 500 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 GRM7Q14831 915 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 UAP1Q16222 522 aaPredicted RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 ATP1A1-AS1Q5TC04 95 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 LCN10Q6JVE6 187 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 RHBDD2Q6NTF9 364 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 FRA10AC1Q70Z53 315 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 LRRC56Q8IYG6 542 aaPredicted RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 TTC9Q92623 222 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 PDLIM5Q96HC4 596 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 GPR22Q99680 433 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 ZFYVE21Q9BQ24 234 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 PLCD4Q9BRC7 762 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 UNKQ9C0B0 810 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 PCBD2Q9H0N5 130 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 NINJ2Q9NZG7 142 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 CTNNAL1Q9UBT7 734 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 GPN3Q9UHW5 284 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms