RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LDLRAP1Q5SW96 308 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 HENMT1Q5T8I9 393 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 FBXW10Q5XX13 1052 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ZCCHC8Q6NZY4 707 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CRTC3Q6UUV7 619 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ATG14Q6ZNE5 492 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TMPRSS9Q7Z410 1059 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 MAVSQ7Z434 540 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 B3GNT8Q7Z7M8 397 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 SDR16C5Q8N3Y7 309 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TRAM1L1Q8N609 369 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 Q8N9G6 341 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 FAM46DQ8NEK8 389 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 MAPK15Q8TD08 544 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ACTRT2Q8TDY3 377 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 SLC7A6OSQ96CW6 309 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 PPP1R36Q96LQ0 422 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 EGFL8Q99944 293 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 CCDC3Q9BQI4 270 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 C1QTNF3Q9BXJ4 246 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ZCCHC2Q9C0B9 1178 aaKnown RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 C1orf21Q9H246 121 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 DPEP2Q9H4A9 486 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 MID1IP1Q9NPA3 183 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ACSS2Q9NR19 701 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 LATS2Q9NRM7 1088 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 PHPT1Q9NRX4 125 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-216ENST00000484087 SMOXQ9NWM0 555 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 NDE1Q9NXR1 346 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 TMPRSS11EQ9UL52 423 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 KCNK6Q9Y257 313 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 ANGPTL3Q9Y5C1 460 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 UNC13CQ8NB66 2214 aa6.74□□□□□ -1.33
BRCA1-216ENST00000484087 IGLV3-16A0A075B6K0 115 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PRAMEF33A0A0G2JMD5 474 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 NCF1BA6NI72 391 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 NCF1CA8MVU1 366 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 AZIN1O14977 448 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 GSC2O15499 205 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 KLK8O60259 260 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 MGRN1O60291 552 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 VPS4BO75351 444 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 CSO75390 466 aaKnown RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 SKAP2O75563 359 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 CIB2O75838 187 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 SIX3O95343 332 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 TSPAN12O95859 305 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 MT-CO3P00414 261 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PROS1P07225 676 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 FGF4P08620 206 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 RPS17P08708 135 aaKnown RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 HIST1H2AGP0C0S8 130 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ACP5P13686 325 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 MTHFD2P13995 350 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 NCF1P14598 390 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 JUPP14923 745 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ZNF8P17098 575 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 VCLP18206 1134 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 HIST1H2ADP20671 130 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PGM1P36871 562 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ARL1P40616 181 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ACTR1BP42025 376 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PIK3CGP48736 1102 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 RPIAP49247 311 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 INHBCP55103 352 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 CDH13P55290 713 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PKNOX1P55347 436 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ACTR1AP61163 376 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 STX1BP61266 288 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 KLF10Q13118 480 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 RIPK1Q13546 671 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ELOCQ15369 112 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 NR0B2Q15466 257 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 RBBP7Q16576 425 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PLEKHS1Q5SXH7 462 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 GPRC6AQ5T6X5 926 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 SULT1C3Q6IMI6 304 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 METTL2BQ6P1Q9 378 aaKnown RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 CHST15Q7LFX5 561 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 TREML1Q86YW5 311 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 TCAIMQ8N3R3 496 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 CLDN19Q8N6F1 224 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 TRPC4APQ8TEL6 797 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 BTN2A2Q8WVV5 523 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 ATP6V1E2Q96A05 226 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 THAP11Q96EK4 314 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 MOCOSQ96EN8 888 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 C19orf60Q96EN9 201 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 PRR11Q96HE9 360 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 COX14Q96I36 57 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 MAELQ96JY0 434 aaKnown RBP6.73□□□□□ -1.33
BRCA1-216ENST00000484087 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 VPS35Q96QK1 796 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 OR52B2Q96RD2 323 aa6.73□□□□□ -1.33
BRCA1-216ENST00000484087 SLC30A3Q99726 388 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms