RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 USE1Q9NZ43 259 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 RIMKLBQ9ULI2 386 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 FAM155AB1AL88 458 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 FXYD1O00168 92 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 OCM2P0CE71 109 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 OCMP0CE72 109 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 OR1E2P47887 323 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 PSMD7P51665 324 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CDH12P55289 794 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 RPL26P61254 145 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 TRAF3Q13114 568 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 SLBPQ14493 270 aaKnown RBP eCLIP8.89□□□□□ -0.99
CALD1-220ENST00000482470 SLC14A2Q15849 920 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 UAP1L1Q3KQV9 507 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 GALNT7Q86SF2 657 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CHERPQ8IWX8 916 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 RAB42Q8N4Z0 105 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 TTC29Q8NA56 475 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 VANGL1Q8TAA9 524 aaPredicted RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 NETO1Q8TDF5 533 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 TSPEARQ8WU66 669 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 GTPBP3Q969Y2 492 aaKnown RBP8.89□□□□□ -0.99
CALD1-220ENST00000482470 COL26A1Q96A83 441 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 PLGRKTQ9HBL7 147 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 CTPS2Q9NRF8 586 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 DAPK2Q9UIK4 370 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 ZNF225Q9UK10 706 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 FZD4Q9ULV1 537 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 TMEM98Q9Y2Y6 226 aa8.89□□□□□ -0.99
CALD1-220ENST00000482470 NADKO95544 446 aaPredicted RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 ZDHHC11BP0C7U3 371 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PRPS1L1P21108 318 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCSK6P29122 969 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PSMD8P48556 350 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SPINT3P49223 89 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 CCR3P51677 355 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 RPS13P62277 151 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 ALDH6A1Q02252 535 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 ACVR1Q04771 509 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TMEM115Q12893 351 aaPredicted RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 PMS2P3Q13401 168 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 RAB39AQ14964 217 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PON2Q15165 354 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 C6orf183Q5T699 404 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 MED27Q6P2C8 311 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SLC39A5Q6ZMH5 540 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PHYKPLQ8IUZ5 450 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SLC39A11Q8N1S5 342 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 FAM86B1Q8N7N1 296 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ZFAND2BQ8WV99 257 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 MAL2Q969L2 176 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ISOC1Q96CN7 298 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 IL17FQ96PD4 163 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 P2RY13Q9BPV8 354 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ZNF385DQ9H6B1 395 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TPT1P8Q9HAU6 139 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 LTB4R2Q9NPC1 389 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCDHGA11Q9Y5H2 935 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCDHA9Q9Y5H5 950 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 LOC100130705A0A1B0GUX0 176 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TRIM43BA6NCK2 446 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 WNT9AO14904 365 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCDH7O60245 1069 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 FGBP02675 491 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 RHOP08100 348 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SMIM18P0DKX4 95 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SYN1P17600 705 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 NUDT6P53370 316 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 CBLBQ13191 982 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 GANABQ14697 944 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 CYP2A13Q16696 494 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TNFAIP8L2Q6P589 184 aaPredicted RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 PHF10Q8WUB8 498 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 EXOSC8Q96B26 276 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 TIFAQ96CG3 184 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ACPTQ9BZG2 426 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 EPB41L1Q9H4G0 881 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 OLAHQ9NV23 265 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TBC1D14Q9P2M4 693 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PHF24Q9UPV7 400 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 RUVBL1Q9Y265 456 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 AP3M1Q9Y2T2 418 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ABHD14A-ACY1A0A1B0GW23 586 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 FAM92AA1XBS5 289 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SLC9A3R1O14745 358 aaPredicted RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 SGTAO43765 313 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TPST2O60704 377 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 PCCBP05166 539 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 KLK1P06870 262 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 TNFRSF1BP20333 461 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 RRM2P31350 389 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 SLC5A2P31639 672 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 CDK9P50750 372 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 PLA2G16P53816 162 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 MANFP55145 182 aaKnown RBP8.88□□□□□ -0.99
CALD1-220ENST00000482470 DOC2AQ14183 400 aa8.88□□□□□ -0.99
CALD1-220ENST00000482470 ZNF783Q6ZMS7 281 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms