RNA–Protein interactions for RNA: ENST00000482243.1

TRAIP-207, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-207ENST00000482243 FAM46DQ8NEK8 389 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 OR2T11Q8NH01 316 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 GAB3Q8WWW8 586 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 USP7Q93009 1102 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 HBEGFQ99075 208 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 NRTNQ99748 197 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 EFCAB11Q9BUY7 163 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 ACAT2Q9BWD1 397 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 ACTR5Q9H9F9 607 aaPredicted RBP13.57□□□□□ -0.24
TRAIP-207ENST00000482243 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
TRAIP-207ENST00000482243 TAGLN3Q9UI15 199 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 SLC12A4Q9UP95 1085 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 ICKQ9UPZ9 632 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 COPG1Q9Y678 874 aaKnown RBP13.57□□□□□ -0.24
TRAIP-207ENST00000482243 TRIOO75962 3097 aa13.57□□□□□ -0.24
TRAIP-207ENST00000482243 KIR2DS5A0A0G2JLQ3 304 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 A0A0G2JNG1 304 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 ANKRD65E5RJM6 399 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 KIR2DS3K7RE56 304 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SLC22A2O15244 555 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PDYNP01213 254 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 VIPP01282 170 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PRR35P0CG20 571 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 T-ENOLP0DO92 83 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 CDH1P12830 882 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 NME1P15531 152 aaKnown RBP13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SHMT2P34897 504 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SCTRP47872 440 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 AFF3P51826 1226 aaKnown RBP13.56□□□□□ -0.24
TRAIP-207ENST00000482243 NEK2P51955 445 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 STX1BP61266 288 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 ZNF33BQ06732 778 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SRSF5Q13243 272 aaKnown RBP13.56□□□□□ -0.24
TRAIP-207ENST00000482243 LAPTM5Q13571 262 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 KIR2DS5Q14953 304 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PAGE2BQ5JRK9 111 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 CATSPEREQ5SY80 951 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 MED27Q6P2C8 311 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 Q6ZSR9 355 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 GKN2Q86XP6 184 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 MAML2Q8IZL2 1156 aaPredicted RBP13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 LINC01555Q8NAE3 123 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 HMGCLL1Q8TB92 370 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 LMX1AQ8TE12 382 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 ZFPM2Q8WW38 1151 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 LCN9Q8WX39 176 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 WDR34Q96EX3 536 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 LRRC61Q9BV99 259 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 EHD1Q9H4M9 534 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 ZNF385DQ9H6B1 395 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 TAC3Q9UHF0 121 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 DOLKQ9UPQ8 538 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SH2B3Q9UQQ2 575 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PCDHB11Q9Y5F2 797 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 PCDHGA11Q9Y5H2 935 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 SPAG17Q6Q759 2223 aa13.56□□□□□ -0.24
TRAIP-207ENST00000482243 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 A0A1W2PPV9 198 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 H0YIV9 168 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 HNRNPCL1O60812 293 aaKnown RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 UNC5CO95185 931 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 PCNAP12004 261 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 EZRP15311 586 aaKnown RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 GNSP15586 552 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 XRCC1P18887 633 aaPredicted RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 CD22P20273 847 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 CALB2P22676 271 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 PIK3R1P27986 724 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 PRDX6P30041 224 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 RASSF2P50749 326 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 ATP4BP51164 291 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 NCALDP61601 193 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 HNRNPKP61978 463 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 ERVK-8P63133 956 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 IRX1P78414 480 aaPredicted RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 SLBPQ14493 270 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 NAA25Q14CX7 972 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 KIF19Q2TAC6 998 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 AP5B1Q2VPB7 878 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 PMS2CLQ68D20 193 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 OGFOD2Q6N063 350 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 AMIGO1Q86WK6 493 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 KRT78Q8N1N4 520 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 OR4E2Q8NGC2 313 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 ZDHHC1Q8WTX9 485 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 JPH3Q8WXH2 748 aaPredicted RBP13.55□□□□□ -0.24
TRAIP-207ENST00000482243 UBE2E3Q969T4 207 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 REPS1Q96D71 796 aa13.55□□□□□ -0.24
TRAIP-207ENST00000482243 CMTM5Q96DZ9 223 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms