RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ZNF582Q96NG8 517 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 NEK1Q96PY6 1258 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 CDRT15Q96T59 188 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 MOV10L1Q9BXT6 1211 aaKnown RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 PPIL3Q9H2H8 161 aaKnown RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 MMP27Q9H306 513 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 SLA2Q9H6Q3 261 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 ZBTB20Q9HC78 741 aaPredicted RBP3.39□□□□□ -1.87
COPA-204ENST00000481522 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 RPS6KA6Q9UK32 745 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 GAB2Q9UQC2 676 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 MED13LQ71F56 2210 aa3.39□□□□□ -1.87
COPA-204ENST00000481522 OTOGQ6ZRI0 2925 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 SMCHD1A6NHR9 2005 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 LOC102723996A0A087X1L8 192 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 PRSS51A0A1B0GVH4 220 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 GLOD5A6NK44 160 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 MAGEB17A8MXT2 336 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 TO15178 435 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 ADAMDEC1O15204 470 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 NR3C1P04150 777 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 TPOP07202 933 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 CKMT2P17540 419 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 GNAZP19086 355 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 TIMP3P35625 211 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 NNMTP40261 264 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 HSD17B4P51659 736 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 KRTAP10-3P60369 221 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 RPS18P62269 152 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 SLC35E4Q6ICL7 350 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 DNAAF5Q86Y56 855 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 KLHDC8BQ8IXV7 354 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 GUF1Q8N442 669 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 FBXO39Q8N4B4 442 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 MINDY1Q8N5J2 469 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 L3MBTL4Q8NA19 623 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 PAPD5Q8NDF8 572 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 KLHDC9Q8NEP7 349 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 LPGAT1Q92604 370 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 DAZLQ92904 295 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 ZNF622Q969S3 477 aaKnown RBP eCLIP3.38□□□□□ -1.874e-10■□□□□ 9.7
COPA-204ENST00000481522 WBP2Q969T9 261 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 ERO1AQ96HE7 468 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 OR6C1Q96RD1 312 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.38□□□□□ -1.87
COPA-204ENST00000481522 MBNL1Q9NR56 388 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 OLFML3Q9NRN5 406 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 PTTG2Q9NZH5 202 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 CPSF2Q9P2I0 782 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 PPIEQ9UNP9 301 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 ASTN2O75129 1339 aaPredicted RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 UTP20O75691 2785 aaKnown RBP3.38□□□□□ -1.87
COPA-204ENST00000481522 TGP01266 2768 aa3.38□□□□□ -1.87
COPA-204ENST00000481522 GPR75-ASB3A0A0A6YYF3 556 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 TEX13DA0A0J9YY54 714 aaPredicted RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 ELOVL7A1L3X0 281 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CLIC2O15247 247 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 SYNCRIPO60506 623 aaKnown RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 TSPAN1O60635 241 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 ZG16O60844 167 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CREG1O75629 220 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 PGM3O95394 542 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CFC1P0CG37 223 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 FGF5P12034 268 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 MSH3P20585 1137 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 THOP1P52888 689 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CRIP2P52943 208 aaPredicted RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 ATP12AP54707 1039 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CDK3Q00526 305 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 BAATQ14032 418 aaPredicted RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 TECRLQ5HYJ1 363 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 WDR38Q5JTN6 314 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CFAP58Q5T655 872 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 DENND5BQ6ZUT9 1274 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 ADGRA1Q86SQ6 560 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 CEP57Q86XR8 500 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 STPG4Q8N801 248 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 PPFIBP2Q8ND30 876 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 ZNF501Q96CX3 271 aaPredicted RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 C16orf70Q9BSU1 422 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 ABHD6Q9BV23 337 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 BICC1Q9H694 974 aaKnown RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 ECHDC1Q9NTX5 307 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 NPAP1Q9NZP6 1156 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 WBP11Q9Y2W2 641 aaKnown RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 GRIP1Q9Y3R0 1128 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.37□□□□□ -1.87
COPA-204ENST00000481522 SPIN1Q9Y657 262 aaPredicted RBP3.37□□□□□ -1.87
COPA-204ENST00000481522 NSD2O96028 1365 aa3.37□□□□□ -1.87
COPA-204ENST00000481522 RGPD5Q99666 1765 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 IPO8O15397 1037 aaKnown RBP3.36□□□□□ -1.87
COPA-204ENST00000481522 XRCC3O43542 346 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 PCDH7O60245 1069 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 CIDEAO60543 219 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 BCL10O95999 233 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 CCL5P13501 91 aa3.36□□□□□ -1.87
COPA-204ENST00000481522 CBLP22681 906 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms