RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 HMGCLL1Q8TB92 370 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SLC37A2Q8TED4 501 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 ZDHHC1Q8WTX9 485 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SELENOMQ8WWX9 145 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 LCN9Q8WX39 176 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 USP7Q93009 1102 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 MAGEB10Q96LZ2 347 aaPredicted RBP10.83□□□□□ -0.68
APTX-223ENST00000479656 CCT7Q99832 543 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 HAUS8Q9BT25 410 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 RAB11FIP5Q9BXF6 653 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 ELOVL6Q9H5J4 265 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 ARL8BQ9NVJ2 186 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 CPNE7Q9UBL6 633 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SPASTQ9UBP0 616 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 DOLKQ9UPQ8 538 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 CCL27Q9Y4X3 112 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 SNX11Q9Y5W9 270 aa10.83□□□□□ -0.68
APTX-223ENST00000479656 KIR2DS5A0A0G2JLQ3 304 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 A0A0G2JNG1 304 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 CAPN14A8MX76 684 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 ANKRD65E5RJM6 399 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 KIR2DS3K7RE56 304 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 KDM1AO60341 852 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 VPS4BO75351 444 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 CBX6O95503 412 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 T-ENOLP0DO92 83 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 CDH1P12830 882 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 GNSP15586 552 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 LBPP18428 481 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 HNF4AP41235 474 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 MEF2AQ02078 507 aaPredicted RBP10.82□□□□□ -0.68
APTX-223ENST00000479656 GPR18Q14330 331 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 KIR2DS5Q14953 304 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 TBCCQ15814 346 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 KIF19Q2TAC6 998 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 FRG2Q64ET8 278 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 ATG9BQ674R7 924 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 GRHL2Q6ISB3 625 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 CHSY3Q70JA7 882 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 CEP68Q76N32 757 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 TRIM46Q7Z4K8 759 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 BMP8AQ7Z5Y6 402 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 YTHDF3Q7Z739 585 aaKnown RBP10.82□□□□□ -0.68
APTX-223ENST00000479656 C17orf64Q86WR6 236 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 GKN2Q86XP6 184 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 OR2A1Q8NGT9 310 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 PIGKQ92643 395 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 PTCD3Q96EY7 689 aaKnown RBP10.82□□□□□ -0.68
APTX-223ENST00000479656 FRG2BQ96QU4 278 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 PCBD2Q9H0N5 130 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 SRMSQ9H3Y6 488 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 RIC8BQ9NVN3 520 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 SPHK1Q9NYA1 384 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 PILRBQ9UKJ0 227 aa10.82□□□□□ -0.68
APTX-223ENST00000479656 B4DGG1 531 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 SLC28A1O00337 649 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 AQP9O43315 295 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 PRICKLE3O43900 615 aaPredicted RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 ALDOCP09972 364 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 PRR35P0CG20 571 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 SP9P0CG40 484 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 CD1EP15812 388 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 PEBP1P30086 187 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 SHMT2P34897 504 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 UBE2IP63279 158 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 HMGCS1Q01581 520 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 BNC1Q01954 994 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 BNIP3Q12983 259 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 E2F2Q14209 437 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 SLBPQ14493 270 aaKnown RBP eCLIP10.81□□□□□ -0.68
APTX-223ENST00000479656 PLCL1Q15111 1095 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 IMPG1Q17R60 797 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 LACTB2Q53H82 288 aaPredicted RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 C6orf136Q5SQH8 315 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 FAM20CQ8IXL6 584 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 CPSF7Q8N684 471 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 ZNF548Q8NEK5 533 aaPredicted RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 WDR20Q8TBZ3 569 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 NELL1Q92832 810 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 WDR34Q96EX3 536 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 NSL1Q96IY1 281 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 SPNS1Q9H2V7 528 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 POT1Q9NUX5 634 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 CUEDC1Q9NWM3 386 aaPredicted RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 UCKL1Q9NWZ5 548 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 GEMIN8Q9NWZ8 242 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 PCDHB11Q9Y5F2 797 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 PCDHGA11Q9Y5H2 935 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 COPG1Q9Y678 874 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 ISM1B1AKI9 464 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 H0YIV9 168 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 H7BY64 318 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 BTN3A3O00478 584 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 LSM1O15116 133 aaKnown RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 RGS14O43566 566 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 PIAS2O75928 621 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 CHRM5P08912 532 aaPredicted RBP10.81□□□□□ -0.68
APTX-223ENST00000479656 PCNAP12004 261 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 SLC2A4P14672 509 aa10.81□□□□□ -0.68
APTX-223ENST00000479656 CTSKP43235 329 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms