RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 HMX2A2RU54 273 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 HCRTR1O43613 425 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 SCRG1O75711 98 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 NTRK1P04629 796 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ABHD2P08910 425 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ENO2P09104 434 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 FGF5P12034 268 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CD82P27701 267 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CRABP2P29373 138 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ITGA1P56199 1179 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 AP1S2P56377 157 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 IRF9Q00978 393 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 SRSF6Q13247 344 aaKnown RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CLN3Q13286 438 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 NAE1Q13564 534 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 SLC29A2Q14542 456 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 PPP1R3AQ16821 1122 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ERCC6LQ2NKX8 1250 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 TAF1BQ53T94 588 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 PRAMEF13Q5VWM6 474 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ICE2Q659A1 982 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 FCRL6Q6DN72 434 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 AGTRAPQ6RW13 159 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 GPR135Q8IZ08 494 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CACNA2D3Q8IZS8 1091 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 IL22RA1Q8N6P7 574 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 GALNT6Q8NCL4 622 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 OR2A1Q8NGT9 310 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 PDLIM5Q96HC4 596 aaKnown RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 FCRL4Q96PJ5 515 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 DPH7Q9BTV6 452 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 TXLNGYQ9BZA5 131 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 SLC7A5P2Q9GIP4 190 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 VPS11Q9H270 941 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ALG9Q9H6U8 611 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 SLC6A20Q9NP91 592 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CUEDC1Q9NWM3 386 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-215ENST00000478531 TLK1Q9UKI8 766 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 CACNA1GO43497 2377 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 ATRXP46100 2492 aa6.63□□□□□ -1.35
BRCA1-215ENST00000478531 A0A0J9YVX5 310 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SMIM23A6NLE4 172 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 TRIM49D1C9J1S8 452 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 PRICKLE3O43900 615 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 RAD1O60671 282 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 OR2B3O76000 313 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 KRT38O76015 456 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CCNDBP1O95273 360 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 WISP3O95389 354 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 ALDOAP04075 364 aaKnown RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CTSBP07858 339 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 LTA4HP09960 611 aaKnown RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CD1DP15813 335 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 TFEBP19484 476 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 TYK2P29597 1187 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 GLRBP48167 497 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SERPINB9P50453 376 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 DLG1Q12959 904 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 OR4D1Q15615 310 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 FBXO48Q5FWF7 155 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 MANEAQ5SRI9 462 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 BROXQ5VW32 411 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 C19orf48Q6RUI8 117 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 GPSM1Q86YR5 675 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 NLGN4XQ8N0W4 816 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 EIF1ADQ8N9N8 165 aaKnown RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 NLGN4YQ8NFZ3 816 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 DCAKDQ8WVC6 231 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 KCTD4Q8WVF5 259 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 ATL1Q8WXF7 558 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 PTERQ96BW5 349 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CLIP3Q96DZ5 547 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 TSNARE1Q96NA8 513 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SELENOSQ9BQE4 189 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 DPH1Q9BZG8 443 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 B3GNT4Q9C0J1 378 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 TWSG1Q9GZX9 223 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 EPB41L4BQ9H329 900 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 STARD5Q9NSY2 213 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SERTAD3Q9UJW9 196 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 PILRAQ9UKJ1 303 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 ACSL6Q9UKU0 697 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 RNF112Q9ULX5 631 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 NOVA2Q9UNW9 492 aaKnown RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SH2B3Q9UQQ2 575 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 ACOT9Q9Y305 439 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 OARD1Q9Y530 152 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SCN3AQ9NY46 2000 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 A0A087X1B8 175 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 A0A096LPK6 155 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 IGKV1-8A0A0C4DH67 115 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SUPT3HB4E1H0 165 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 E7EQ34 232 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CTSVO60911 334 aa6.62□□□□□ -1.35
BRCA1-215ENST00000478531 CPNE3O75131 537 aaKnown RBP6.62□□□□□ -1.35
BRCA1-215ENST00000478531 SUPT3HO75486 399 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms