RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 GARNL3Q5VVW2 1013 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 B3GNTL1Q67FW5 361 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 NEPROQ6NW34 567 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 NEK10Q6ZWH5 1172 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 OR2A1Q8NGT9 310 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CALML6Q8TD86 181 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 MS4A3Q96HJ5 214 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 BIRC8Q96P09 236 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 EBNA1BP2Q99848 306 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 SOX17Q9H6I2 414 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 SLC22A11Q9NSA0 550 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 KLHL42Q9P2K6 505 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 CTSFQ9UBX1 484 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 ZC3H7BQ9UGR2 993 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 HS3ST3B1Q9Y662 390 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 COMMD10Q9Y6G5 202 aa13.81□□□□□ -0.2
SMARCE1-209ENST00000478349 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 OR2A25A4D2G3 310 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CTAGE9A4FU28 777 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 ANKUB1A6NFN9 424 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 MYO1CO00159 1063 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 SOCS6O14544 535 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CTSVO60911 334 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 NIPSNAP2O75323 286 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 HPP00738 406 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 ANXA5P08758 320 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 MCM3P25205 808 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 ARNTP27540 789 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 PSMB5P28074 263 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 MAGEA6P43360 314 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 GLRBP48167 497 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 PER3P56645 1201 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 GPS1Q13098 491 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 MRPL49Q13405 166 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 TSTA3Q13630 321 aaPredicted RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 DHX34Q14147 1143 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 GBX1Q14549 363 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 TLR1Q15399 786 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 NR6A1Q15406 480 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 LRRC8EQ6NSJ5 796 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CILP2Q8IUL8 1156 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CISD2Q8N5K1 135 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 KCNJ9Q92806 393 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 C5orf34Q96MH7 638 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 DPH7Q9BTV6 452 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 ASF1BQ9NVP2 202 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 SLC5A6Q9Y289 635 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 CRYL1Q9Y2S2 319 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 PCDHGA10Q9Y5H3 936 aa13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 USP9XQ93008 2570 aaPredicted RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-209ENST00000478349 GOLGA6L10A0A0M3HER8 536 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 SDR42E2A6NKP2 422 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 VSTM2BA6NLU5 285 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 PSIP1O75475 530 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 ERGP11308 486 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 TSFMP43897 325 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 OR1D4P47884 311 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 KCNJ1P48048 391 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 VPS41P49754 854 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 DSG2Q14126 1118 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 KCNJ11Q14654 390 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 NDUFA9Q16795 377 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 EIF2S3LQ2VIR3 472 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 KLHL38Q2WGJ6 581 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 KIRREL2Q6UWL6 708 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 ISLR2Q6UXK2 745 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 METTL27Q8N6F8 245 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 CSNK1A1LQ8N752 337 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 FBXO15Q8NCQ5 510 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 OR11G2Q8NGC1 345 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 DNAJB14Q8TBM8 379 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 GRK7Q8WTQ7 553 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 ZNF669Q96BR6 464 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 ACAT2Q9BWD1 397 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 C3orf18Q9UK00 162 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 MAU2Q9Y6X3 613 aa13.79□□□□□ -0.2
SMARCE1-209ENST00000478349 NSG1A0A0A6YYJ2 146 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 PABPN1LA6NDY0 278 aaKnown RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ARHGEF33A8MVX0 844 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 GOLGA8TH3BQL2 631 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 SEMA7AO75326 666 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 KRT14P02533 472 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ZGLP1P0C6A0 271 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 MYBL2P10244 700 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms