RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TGFBIQ15582 683 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CRY1Q16526 586 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ZXDCQ2QGD7 858 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MYLK3Q32MK0 819 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PLEKHG6Q3KR16 790 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NHSL2Q5HYW2 709 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PITRM1Q5JRX3 1037 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 C6orf136Q5SQH8 315 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ARMC12Q5T9G4 340 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PTRHD1Q6GMV3 140 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 GTF2H2CQ6P1K8 395 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 METTL2BQ6P1Q9 378 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 C16orf59Q7L2K0 433 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TAS2R42Q7RTR8 314 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TAS1R1Q7RTX1 841 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 BMP8AQ7Z5Y6 402 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SPPL2CQ8IUH8 684 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 HID1Q8IV36 788 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 FAM126BQ8IXS8 530 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PIANPQ8IYJ0 282 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 RNF168Q8IYW5 571 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MYO1HQ8N1T3 1032 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 METTL25Q8N6Q8 603 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TRIML2Q8N7C3 387 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 DCAF4L2Q8NA75 395 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 FNDC5Q8NAU1 212 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 LEMD2Q8NC56 503 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PDPRQ8NCN5 879 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 EEF1AKMT1Q8WVE0 214 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 TFAP2CQ92754 450 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NMD3Q96D46 503 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 RMND5BQ96G75 393 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MPP4Q96JB8 637 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PPP3R2Q96LZ3 170 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ZBTB18Q99592 522 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 SLC29A1Q99808 456 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 HERC2P3Q9BVR0 1158 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 FAM126AQ9BYI3 521 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CLPBQ9H078 707 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MTIF3Q9H2K0 278 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 NKX2-4Q9H2Z4 354 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF552Q9H707 407 aaPredicted RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 FBRSQ9HAH7 460 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 CLK4Q9HAZ1 481 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 BPIFA1Q9NP55 256 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 AGPAT4Q9NRZ5 378 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 DUS2Q9NX74 493 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 IL17CQ9P0M4 197 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 DNMT3BQ9UBC3 853 aaKnown RBP4.83□□□□□ -1.64
SF3B6-202ENST00000478050 GALPQ9UBC7 116 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 GNPTGQ9UJJ9 305 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 ZNF225Q9UK10 706 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PCDHGB4Q9UN71 923 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 AURKCQ9UQB9 309 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 AP3M1Q9Y2T2 418 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 OARD1Q9Y530 152 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 YIPF1Q9Y548 306 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PCDHGB5Q9Y5G0 923 aa4.83□□□□□ -1.64
SF3B6-202ENST00000478050 PLXNA2O75051 1894 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TRBV5-4A0A0C4DH59 114 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RNF103-CHMP3A0A140T963 221 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CXorf51AA0A1B0GTR3 108 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FITM1A5D6W6 292 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CHURC1-FNTBB4DL54 471 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 C9JVG2 144 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 EIF3FO00303 357 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR7A17O14581 309 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 INPP4BO15327 924 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 FFAR2O15552 330 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RGS14O43566 566 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 OR1I1O60431 355 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SNAP91O60641 907 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 GMNNO75496 209 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 BAIAP3O94812 1187 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 RASAL1O95294 804 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SEC24AO95486 1093 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CD160O95971 181 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 IGSF6O95976 241 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 LDLRP01130 860 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CXCL10P02778 98 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 SOD2P04179 222 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ASLP04424 464 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CAPN1P07384 714 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ANXA6P08133 673 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CBSLP0DN79 551 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 MBL2P11226 248 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CDH1P12830 882 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 ETS2P15036 469 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 HOXB6P17509 224 aaKnown RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 JAK1P23458 1154 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TPP2P29144 1249 aaPredicted RBP4.82□□□□□ -1.64
SF3B6-202ENST00000478050 TTKP33981 857 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CBSP35520 551 aa4.82□□□□□ -1.64
SF3B6-202ENST00000478050 CSKP41240 450 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms